| Protein: | PP154_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 849 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PP154_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
601.0 | [0..1] | [821..336] |
|
|
600.0 | [0..7] | [847..130] |
|
|
577.0 | [0..7] | [847..50] |
|
|
563.0 | [0..5] | [821..151] |
|
Region A: Residues: [1-172] |
1 11 21 31 41 51
| | | | | |
1 MTKSNGHNAT MIVTGACDFS SSFSLASSSS STVSVTTFNI SSLSSNPNII NSSSTLFRSL 60
61 SFSLIRHRSS YSRRSLRRLS IHTVHGNKTQ FFSHSSTRTP PLFTANSTAQ RSGTFVEHLT 120
121 GITESEEGIS EANGFGDVES ARNDIRNVAT RRIETEFEVR ELEELPEEWR RS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [173-601] |
1 11 21 31 41 51
| | | | | |
1 KLAWLCKEVP THKAVTLVRL LNAQKKWVRQ EDATYISVHC MRIRENETGF RVYRWMTQQN 60
61 WYRFDFGLTT KLAEYLGKER KFTKCREVFD DVLNQGRVPS ESTFHILVVA YLSSLSVEGC 120
121 LEEACSVYNR MIQLGGYKPR LSLHNSLFRA LVSKQGGILN DQLKQAEFIF HNVVTTGLEV 180
181 QKDIYSGLIW LHSCQDEVDI GRINSLREEM KKAGFQESKE VVVSLLRAYA KEGGVEEVER 240
241 TWLELLDLDC GIPSQAFVYK IEAYSKVGDF AKAMEIFREM EKHIGGATMS GYHKIIEVLC 300
301 KVQQVELVET LMKEFEESGK KPLLPSFIEI AKMYFDLGLH EKLEMAFVQC LEKCQPSQPI 360
361 YNIYLDSLTK IGNLEKAGDV FNEMKNNGTI NVSARSCNSL LKGYLDCGKQ VQAERIYDLM 420
421 RMKKYEIEP
|
| Detection Method: | |
| Confidence: | 33.69897 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [602-770] |
1 11 21 31 41 51
| | | | | |
1 PLMEKLDYIL SLKKKEVKKR PFSMKLSKDQ REVLVGLLLG GLQIESDKEK KSHMIKFEFR 60
61 ENSQAHLVLK QNIHDQFREW LHPLSNFQED IIPFEFYSVP HSYFGFYAEH YWPKGQPEIP 120
121 KLIHRWLSPH SLAYWYMYSG VKTSSGDIIL RLKGSLEGVE KVVKALQAK
|
| Detection Method: | |
| Confidence: | 7.0 |
| Match: | 1b89A |
| Description: | Clathrin heavy chain proximal leg segment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [771-849] |
1 11 21 31 41 51
| | | | | |
1 SMECRVKKKG KVFWIGLQGT NSALFWKLIE PHVLENLKEH LKPASESLDN VKEAEEQSIN 60
61 FKSNSDHSDD CVNSEAHFY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
