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Protein Overview: PP154_ARATH

General Information:
Name(s) found: PP154_ARATH [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • Pentatricopeptide repeat-containing protein At2g15820, chloroplastic OS=Arabidopsis thaliana GN=OTP51 PE=2 SV=3 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 849 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [RCA]
    Biological Process: Group II intron splicing [IMP]
    nuclear mRNA cis splicing, via spliceosome [IMP]
    photosystem I assembly [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKSNGHNAT MIVTGACDFS SSFSLASSSS STVSVTTFNI SSLSSNPNII NSSSTLFRSL  60
   61 SFSLIRHRSS YSRRSLRRLS IHTVHGNKTQ FFSHSSTRTP PLFTANSTAQ RSGTFVEHLT 120
  121 GITESEEGIS EANGFGDVES ARNDIRNVAT RRIETEFEVR ELEELPEEWR RSKLAWLCKE 180
  181 VPTHKAVTLV RLLNAQKKWV RQEDATYISV HCMRIRENET GFRVYRWMTQ QNWYRFDFGL 240
  241 TTKLAEYLGK ERKFTKCREV FDDVLNQGRV PSESTFHILV VAYLSSLSVE GCLEEACSVY 300
  301 NRMIQLGGYK PRLSLHNSLF RALVSKQGGI LNDQLKQAEF IFHNVVTTGL EVQKDIYSGL 360
  361 IWLHSCQDEV DIGRINSLRE EMKKAGFQES KEVVVSLLRA YAKEGGVEEV ERTWLELLDL 420
  421 DCGIPSQAFV YKIEAYSKVG DFAKAMEIFR EMEKHIGGAT MSGYHKIIEV LCKVQQVELV 480
  481 ETLMKEFEES GKKPLLPSFI EIAKMYFDLG LHEKLEMAFV QCLEKCQPSQ PIYNIYLDSL 540
  541 TKIGNLEKAG DVFNEMKNNG TINVSARSCN SLLKGYLDCG KQVQAERIYD LMRMKKYEIE 600
  601 PPLMEKLDYI LSLKKKEVKK RPFSMKLSKD QREVLVGLLL GGLQIESDKE KKSHMIKFEF 660
  661 RENSQAHLVL KQNIHDQFRE WLHPLSNFQE DIIPFEFYSV PHSYFGFYAE HYWPKGQPEI 720
  721 PKLIHRWLSP HSLAYWYMYS GVKTSSGDII LRLKGSLEGV EKVVKALQAK SMECRVKKKG 780
  781 KVFWIGLQGT NSALFWKLIE PHVLENLKEH LKPASESLDN VKEAEEQSIN FKSNSDHSDD 840
  841 CVNSEAHFY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] deduced N/A No confident structure predictions are available.
    2 View Details [173..601] PSI-BLAST 33.69897 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.
    3 View Details [602..770] PSI-BLAST 7.0 Clathrin heavy chain proximal leg segment
    4 View Details [771..849] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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