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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PP154_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKSNGHNAT MIVTGACDFS SSFSLASSSS STVSVTTFNI SSLSSNPNII NSSSTLFRSL  60
   61 SFSLIRHRSS YSRRSLRRLS IHTVHGNKTQ FFSHSSTRTP PLFTANSTAQ RSGTFVEHLT 120
  121 GITESEEGIS EANGFGDVES ARNDIRNVAT RRIETEFEVR ELEELPEEWR RSKLAWLCKE 180
  181 VPTHKAVTLV RLLNAQKKWV RQEDATYISV HCMRIRENET GFRVYRWMTQ QNWYRFDFGL 240
  241 TTKLAEYLGK ERKFTKCREV FDDVLNQGRV PSESTFHILV VAYLSSLSVE GCLEEACSVY 300
  301 NRMIQLGGYK PRLSLHNSLF RALVSKQGGI LNDQLKQAEF IFHNVVTTGL EVQKDIYSGL 360
  361 IWLHSCQDEV DIGRINSLRE EMKKAGFQES KEVVVSLLRA YAKEGGVEEV ERTWLELLDL 420
  421 DCGIPSQAFV YKIEAYSKVG DFAKAMEIFR EMEKHIGGAT MSGYHKIIEV LCKVQQVELV 480
  481 ETLMKEFEES GKKPLLPSFI EIAKMYFDLG LHEKLEMAFV QCLEKCQPSQ PIYNIYLDSL 540
  541 TKIGNLEKAG DVFNEMKNNG TINVSARSCN SLLKGYLDCG KQVQAERIYD LMRMKKYEIE 600
  601 PPLMEKLDYI LSLKKKEVKK RPFSMKLSKD QREVLVGLLL GGLQIESDKE KKSHMIKFEF 660
  661 RENSQAHLVL KQNIHDQFRE WLHPLSNFQE DIIPFEFYSV PHSYFGFYAE HYWPKGQPEI 720
  721 PKLIHRWLSP HSLAYWYMYS GVKTSSGDII LRLKGSLEGV EKVVKALQAK SMECRVKKKG 780
  781 KVFWIGLQGT NSALFWKLIE PHVLENLKEH LKPASESLDN VKEAEEQSIN FKSNSDHSDD 840
  841 CVNSEAHFY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle