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View Structure Prediction Details

Protein: PAI2_ARATH
Organism: Arabidopsis thaliana
Length: 275 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAI2_ARATH.

Description E-value Query
Range
Subject
Range
PAI1_ARATH - N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic OS=Arabidopsis thaliana GN=PAI1 PE=2 SV...
263.0 [0..1] [275..1]

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Predicted Domain #1
Region A:
Residues: [1-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTGISTDLH VHFGALNFSK TYKSGLSNRT VSFSRVGYAQ NRKLSCSVSN TENVAPKDDE  60
   61 RGKDRPLVKM CGITSARDAA MAVEAGADFI GMIIWPHSKR SISLSVAKDI SKVAREGGAK 120
  121 PVGVFVEDDD NTILRAADSS DLELVQLHGN GSRAAFSRLV RKRRVIYVLN ANQDGKLLNE 180
  181 VPEEDCHLAD WILVDSATGG SGHGFNWAQF KLPSVRSRNG WLLAGGINPT NVSEALSILQ 240
  241 PDGIDVSSGI CGTDGIQKDK SKISSFITAV RSVHY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.0
Match: 1piiA
Description: THREE-DIMENSIONAL STRUCTURE OF THE BIFUNCTIONAL ENZYME PHOSPHORIBOSYLANTHRANILATE ISOMERASE: INDOLEGLYCEROLPHOSPHATE SYNTHASE FROM ESCHERICHIA COLI REFINED AT 2.0 ANGSTROMS RESOLUTION
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
tryptophan synthase activity 2.99898167480072 bayes_pls_golite062009
indole-3-glycerol-phosphate synthase activity 2.98379231184807 bayes_pls_golite062009
phosphoribosylanthranilate isomerase activity 2.57188946638955 bayes_pls_golite062009
catalytic activity 2.44231061702877 bayes_pls_golite062009
carbon-carbon lyase activity 1.80077901589281 bayes_pls_golite062009
carboxy-lyase activity 1.32677036501434 bayes_pls_golite062009
imidazoleglycerol-phosphate synthase activity 0.567370625225674 bayes_pls_golite062009
lyase activity 0.258652421339738 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle