| Protein: | YAB3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 240 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YAB3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
298.0 | [0..13] | [238..13] |
|
|
287.0 | [0..6] | [238..1] |
|
|
280.0 | [0..6] | [229..1] |
|
|
276.0 | [0..22] | [238..47] |
|
|
270.0 | [0..6] | [238..1] |
|
|
259.0 | [0..15] | [238..7] |
|
|
259.0 | [0..21] | [238..3] |
|
Region A: Residues: [1-143] |
1 11 21 31 41 51
| | | | | |
1 MSSMSMSSSS APAFPPDHFS STDQLCYVHC SFCDTVLAVS VPPSSLFKTV TVRCGHCSNL 60
61 LSVTVSMRAL LLPSVSNLGH SFLPPPPPPP PPNLLEEMRS GGQNINMNMM MSHHASAHHP 120
121 NEHLVMATRN GRSVDHLQEM PRP
|
| Detection Method: |  |
| Confidence: | 44.853872 |
| Match: | PF04690.4 |
| Description: | No description for PF04690.4 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [144-240] |
1 11 21 31 41 51
| | | | | |
1 PPANRPPEKR QRVPSAYNRF IKEEIQRIKA GNPDISHREA FSAAAKNWAH FPHIHFGLMA 60
61 DHPPTKKANV RQQEGEDGMM GREGFYGSAA NVGVAHN
|
| Detection Method: | |
| Confidence: | 1.34 |
| Match: | 2co9A |
| Description: | Solution structure of the HMG_box domain of thymus high mobility group box protein TOX from mouse |
Matching Structure (courtesy of the PDB): |
|
