| Protein: | CAF1P_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 701 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAF1P_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
789.0 | [0..1] | [701..1] |
|
|
733.0 | [0..18] | [700..10] |
|
|
605.0 | [0..33] | [701..71] |
|
|
500.0 | [0..13] | [526..37] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MATSHLTSRS LLVQAQYPIS RLPSNLRLSL SHHKQPAAVA KRRRAPAPSH PAFSSVIRGR 60
61 PKKVPIPENG EPAAGVRVT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [80-182] |
1 11 21 31 41 51
| | | | | |
1 ERGLAYHLDG APFEFQYSYT ETPRARPVAL REAPFLPFGP EVTPRPWTGR KPLPKSRKEL 60
61 PEFDSFMLPP PGKKGVKPVQ SPGPFLAGTE PRYQAASREE VLG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [183-277] |
1 11 21 31 41 51
| | | | | |
1 EPLTKEEVDE LVKATLKTKR QLNIGRDGLT HNMLENIHSH WKRKRVCKIK CKGVCTVDMD 60
61 NVCQQLEEKV GGKVIHHQGG VIFLFRGRNY NYRTR
|
| Detection Method: | |
| Confidence: | 31.69897 |
| Match: | 1jo0A |
| Description: | YhbY homologue HI1333 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [278-472] |
1 11 21 31 41 51
| | | | | |
1 PIYPLMLWKP AAPVYPRLVK KIPDGLTPDE AEDMRKRGRQ LPPICKLGKN GVYLNLVKQV 60
61 REAFEACDLV RVDCSGLNKS DCRKIGAKLK DLVPCTLLSF EFEHILMWRG NDWKSSLPPL 120
121 EENDFKVASD QILNSKEAGS GSALTPIELV NNATSLKKCN LIEGAEKLED SMKSSFENGM 180
181 ILGSACGNPG VCNSE
|
| Detection Method: | |
| Confidence: | 3.92 |
| Match: | 1ln4A |
| Description: | hypothetical protein YhbY |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [473-701] |
1 11 21 31 41 51
| | | | | |
1 GIDGTESSAD APIEFSPSNS ARDLDPSQTS TLYCQSSLLD KSENGELIEM YPDRCGNSEQ 60
61 SPDVPEALTC LMGSSDEIHE LETMRRNCKH LNGSDGVNSD SIVPSYMEGI LLLFKQAIDS 120
121 GMALVLNENE FADANYVYQK SVAFTKTAPR YLVLRHTPRK SHGTQKTEPA KNVRINKHLE 180
181 EHKVSDHVKK KEIVMGGSRM QRNDHAREFL SDVVPQGTLR VDELAKLLA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
