| Protein: | gi|54290883, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 568 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54290883, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
490.0 | [0..1] | [565..1] |
|
|
487.0 | [0..2] | [566..5] |
|
|
476.0 | [0..1] | [566..1] |
|
Region A: Residues: [1-113] |
1 11 21 31 41 51
| | | | | |
1 MSSAAIAISP MVEEFALLPI CFDGSRSPHC LSGSQLQDSI IIFLAVPGAP PMPMSVLGSE 60
61 SIASVKLRIQ RFKGFVVNKQ RLVLDGHELA RNNCHVKDYG LADGNVLHLV IRL
|
| Detection Method: |  |
| Confidence: | 12.69897 |
| Match: | 1z2mA |
| Description: | Crystal Structure of ISG15, the Interferon-Induced Ubiquitin Cross Reactive Protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [114-324] |
1 11 21 31 41 51
| | | | | |
1 ADLRLINIET TSGKKFQFQV DQSRNVKYLK SKLAVEGDED LGEDHKLECD GKELEDHQLI 60
61 ADISKKDDAV IHLFIRKPAK LRTQQVDKDT VVTVVTPQEK ENLQNEAHAV NPAKPAGARP 120
121 ALVEPIIVNH KVKLSLEVMR MISSAIAGLE NGYLPVMSAE GSGGVYFMQD ASGEKNIAVF 180
181 KPRDEEPMAK NNPRGLPVST DGEGMKRGTL V
|
| Detection Method: | |
| Confidence: | 14.39794 |
| Match: | 1oqyA |
| Description: | Structure of the DNA repair protein hHR23a |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [325-381] |
1 11 21 31 41 51
| | | | | |
1 GEGAFREVAA YILDHPIGDH ESEERIGFSG VPPTALVRSL HRGKSFKIGS LQMFIQN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.636 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.540 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.503 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.503 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.486 | a.4.1 | Homeodomain-like |
| View | Download | 0.479 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.479 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.478 | a.4.1 | Homeodomain-like |
| View | Download | 0.478 | a.4.1 | Homeodomain-like |
|
Region A: Residues: [382-568] |
1 11 21 31 41 51
| | | | | |
1 NGSCEDMGPR AFPVKEVHKI AVLDLRLANA DRHAGNILVC KDEEGGNYKL VPIDHGYCLP 60
61 EKFEDCTFEW LYWPQAREPF SDETIAYIKS LDAEEDIKLL KFHGWELSAR CARVLCISTM 120
121 LLKKGAARGL TPYDIGRILC RETVNRDSEI EDIVQEAEGH VLPGSSEVIF LETVSEIIDR 180
181 HLDKKFA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
