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Protein Overview: gi|54290883, gi|...

General Information:
Name(s) found: gi|54291083 [NCBI NR]
gi|54290883 [NCBI NR]
gi|215694407 [NCBI NR]
gi|125597114 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|54291083|dbj|BAD61759.1| putative ubiquitin [Oryza sativa Japonica Group] [NCBI NR]
  • gi|54290883|dbj|BAD61543.1| putative ubiquitin [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215694407|dbj|BAG89400.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125597114|gb|EAZ36894.1| hypothetical protein OsJ_21238 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 568 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAAIAISP MVEEFALLPI CFDGSRSPHC LSGSQLQDSI IIFLAVPGAP PMPMSVLGSE  60
   61 SIASVKLRIQ RFKGFVVNKQ RLVLDGHELA RNNCHVKDYG LADGNVLHLV IRLADLRLIN 120
  121 IETTSGKKFQ FQVDQSRNVK YLKSKLAVEG DEDLGEDHKL ECDGKELEDH QLIADISKKD 180
  181 DAVIHLFIRK PAKLRTQQVD KDTVVTVVTP QEKENLQNEA HAVNPAKPAG ARPALVEPII 240
  241 VNHKVKLSLE VMRMISSAIA GLENGYLPVM SAEGSGGVYF MQDASGEKNI AVFKPRDEEP 300
  301 MAKNNPRGLP VSTDGEGMKR GTLVGEGAFR EVAAYILDHP IGDHESEERI GFSGVPPTAL 360
  361 VRSLHRGKSF KIGSLQMFIQ NNGSCEDMGP RAFPVKEVHK IAVLDLRLAN ADRHAGNILV 420
  421 CKDEEGGNYK LVPIDHGYCL PEKFEDCTFE WLYWPQAREP FSDETIAYIK SLDAEEDIKL 480
  481 LKFHGWELSA RCARVLCIST MLLKKGAARG LTPYDIGRIL CRETVNRDSE IEDIVQEAEG 540
  541 HVLPGSSEVI FLETVSEIID RHLDKKFA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] PSI-BLAST 12.69897 Crystal Structure of ISG15, the Interferon-Induced Ubiquitin Cross Reactive Protein
    2 View Details [114..324] PSI-BLAST 14.39794 Structure of the DNA repair protein hHR23a
    3 View Details [325..381] deduced N/A No confident structure predictions are available.
    4 View Details [382..568] MSA 5.072975 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle