YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|215695255, gi...
Organism: Oryza sativa Japonica Group
Length: 480 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215695255, gi....

Description E-value Query
Range
Subject
Range
SCP34_ARATH - Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2
454.0 [0..30] [476..41]

Back

Predicted Domain #1
Region A:
Residues: [1-480]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASCASPRLK SLCHHPLFII LLALSLLQTI TAEDEQEADR VAFLPGQPRS PQMSQFSGYI  60
   61 TVNSQNGRAL FYWFFEAQAL PSKKPLLLWL NGGPGCSSVG YGAASELGPL MVNGNGTGLE 120
  121 FNKFAWNNEA NLLFLESPVG VGFSYTNTSS DLESIDDRFV AEDTYNFLVN WFKRFPQYKN 180
  181 HDFYISGESY AGHYVPQLAD VVYERNKHVE TNQHINLKGF IVGNAETDDY YDYKGLVEFA 240
  241 WSHSVISDQL YKHVNNVCDF RLSPRSNECN HVMGYIYDQY DMIDIFNVYA PKCNTDDSSL 300
  301 FSTSYSTADM NAKKRLKGTR MYSGYDPCYS SHIEDYMNKM DVQKSLHANT SGLIKDRKWS 360
  361 ICSYSIFDNY DITVFSVLPI YSKLIKAGLR IWVYSGDVDG RVPVIGSRYC VEALGLPVKS 420
  421 QWQPWYLNNQ VAGRFVEYQG LTMATVRGAG HAVPQDKPEQ ALVVINSFLS GRRLPTKNNR 480
  481 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 106.0
Match: 1ivyA
Description: Human 'protective protein', HPP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 4.09944423676394 bayes_pls_golite062009
peptidase activity 2.49064988313037 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.10044305272656 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.3250951453762 bayes_pls_golite062009
binding 0.780364496307855 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.541803897301601 bayes_pls_golite062009
endopeptidase activity 0.43631945855397 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.1174692258176 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle