| Protein: | ARFR_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 700 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARFR_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
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744.0 | [0..1] | [700..1] |
|
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630.0 | [0..8] | [690..63] |
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603.0 | [0..3] | [697..5] |
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602.0 | [0..2] | [698..1] |
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Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MITFVDSAAK ERERESDKCL DPQLWHACAG GMVQMPPVSS KVYYFPQGHA EHAQGHGPVE 60
61 FPGGRVPALV LCRVAGVRFM ADPDTDEVFA KIRLVPVRAN EQGYA
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.512 | N/A | N/A | d.17.1 | Cystatin/monellin |
| View | Download | 0.512 | N/A | N/A | d.17.1 | Cystatin/monellin |
| View | Download | 0.395 | N/A | N/A | d.17.1 | Cystatin/monellin |
| View | Download | 0.310 | N/A | N/A | d.110.3 | PYP-like sensor domain (PAS domain) |
| View | Download | 0.261 | N/A | N/A | d.17.1 | Cystatin/monellin |
| View | Download | 0.252 | N/A | N/A | d.129.6 | Description not found. |
| View | Download | 0.229 | N/A | N/A | b.1.2 | Fibronectin type III |
|
Region A: Residues: [106-283] |
1 11 21 31 41 51
| | | | | |
1 GDADDGIGAA AAAAAQEEKP ASFAKTLTQS DANNGGGFSV PRYCAETIFP RLDYSADPPV 60
61 QTVLAKDVHG VVWKFRHIYR GTPRRHLLTT GWSTFVNQKK LVAGDSIVFM RTENGDLCVG 120
121 IRRAKKGGVG GPEFLPPPPP PPPTPAAGGN YGGFSMFLRG DDDGNKMAAA ARGKVRAR
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| Detection Method: | |
| Confidence: | 39.522879 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [284-398] |
1 11 21 31 41 51
| | | | | |
1 VRPEEVVEAA NLAVSGQPFE VVYYPRASTP EFCVKAGAVR AAMRTQWFAG MRFKMAFETE 60
61 DSSRISWFMG TVSAVQVADP IRWPNSPWRL LQVSWDEPDL LQNVKRVSPW LVELV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.818 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.717 | N/A | N/A | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.717 | N/A | N/A | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.685 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.685 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.636 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.625 | N/A | N/A | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.625 | N/A | N/A | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.603 | N/A | N/A | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.600 | N/A | N/A | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.387 | N/A | N/A | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.357 | N/A | N/A | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.319 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.296 | N/A | N/A | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.287 | N/A | N/A | c.26.2 | Adenine nucleotide alpha hydrolases-like |
|
Region A: Residues: [399-540] |
1 11 21 31 41 51
| | | | | |
1 SNMPAIHLAP FSPPRKKLCV PLYPELPIDG QFPTPMFHGN PLARGVGPMC YFPDGTPAGI 60
61 QGARHAQFGI SLSDLHLNKL QSSLSPHGLH QLDHGMQPRI AAGLIIGHPA ARDDISCLLT 120
121 IGSPQNNKKS DGKKAPAQLM LF
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [541-700] |
1 11 21 31 41 51
| | | | | |
1 GKPILTEQQI SLGDAASVDV KKSSSDGNAE NTVNKSNSDV SSPRSNQNGT TDNLSCGGVP 60
61 LCQDNKVLDV GLETGHCKVF MQSEDVGRTL DLSVVGSYEE LYRRLADMFG IEKAELMSHV 120
121 FYRDAAGALK HTGDEPFSEF TKTARRLNIL TDTSGDNLAR
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| Detection Method: | |
| Confidence: | 1.12 |
| Match: | 1wj6A |
| Description: | Solution structure of RSGI RUH-024, a PB1 domain in human cDNA, KIAA0049 |
Matching Structure (courtesy of the PDB): |
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