| Protein: | EDR2L_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 719 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EDR2L_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
843.0 | [0..1] | [719..1] |
|
|
762.0 | [0..4] | [716..71] |
|
|
749.0 | [0..10] | [719..1] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDNQLPIK TMVIDGNCRV 60
61 EDRGLKTHHG HMVYVLSIYN KKEKHHRITM AAFNIQEALM WKEKIECVID QHQDSLVPSG 120
121 QQYVSFEYKP GMDAG
|
| Detection Method: |  |
| Confidence: | 5.22 |
| Match: | 2ys3A |
| Description: | No description for 2ys3A was found. |
|
Region A: Residues: [136-401] |
1 11 21 31 41 51
| | | | | |
1 RTASSSDHES PFSALEDEND SQRDLLRRTT IGNGPPESIL DWTKEFDAEL SNQSSSNQAF 60
61 SRKHWRLLQC QNGLRIFEEL LEVDYLPRSC SRAMKAVGVV EATCEEIFEL VMSMDGTRYE 120
121 WDCSFHNGRL VEEVDGHTAI LYHRLLLDWF PMVVWPRDLC YVRYWRRNDD GSYVVLFRSR 180
181 EHENCGPQPG FVRAHLESGG FNIAPLKPRN GRPRTQVQHL IQIDLKGWGS GYLPAFQQHC 240
241 LLQMLNSVSG LREWFSQTDD RGQPIR
|
| Detection Method: | |
| Confidence: | 33.69897 |
| Match: | 2r55A |
| Description: | No description for 2r55A was found. |
|
Region A: Residues: [402-479] |
1 11 21 31 41 51
| | | | | |
1 IPVMVNMASS SLALGKGGKH HHKSSLSIDQ TNGASRNSVL MDEDSDDDDE FQIPDSEPEP 60
61 ETSKQDQETD AKKTEEPA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.387 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.387 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.308 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.276 | g.3.7 | Scorpion toxin-like |
| View | Download | 0.253 | d.15.1 | Ubiquitin-like |
| View | Download | 0.246 | c.114.1 | YchN-like |
|
Region A: Residues: [480-619] |
1 11 21 31 41 51
| | | | | |
1 LNIDLSCFSG NLRHDDNENA RNCWRISDGN NFKVRGKSFC DDKRKIPAGK HLMDLVAVDW 60
61 FKDTKRMDHV VRRKGCAAQV AAEKGLFSTV VNVQVPGSTH YSMVFYFVTK ELVPGSLFQR 120
121 FVDGDDEFRN SRLKLIPLVP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.566 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.566 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.520 | N/A | N/A | d.13.1 | HIT-like |
| View | Download | 0.380 | N/A | N/A | d.81.2 | Description not found. |
| View | Download | 0.346 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.342 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.293 | N/A | N/A | d.58.2 | Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain |
| View | Download | 0.287 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.282 | N/A | N/A | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.216 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
|
Region A: Residues: [620-719] |
1 11 21 31 41 51
| | | | | |
1 KGSWIVRQSV GSTPCLLGKA VDCNYIRGPT YLEIDVDIGS STVANGVLGL VIGVITSLVV 60
61 EMAFLVQANT PEELPERLIG AVRVSHVELS SAIVPNLDSD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.891 | N/A | N/A | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.880 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.865 | N/A | N/A | d.58.55 | Description not found. |
| View | Download | 0.863 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.862 | N/A | N/A | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.767 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.761 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.744 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.717 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.711 | N/A | N/A | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.710 | N/A | N/A | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.690 | N/A | N/A | d.58.34 | Formiminotransferase domain of formiminotransferase-cyclodeaminase. |
| View | Download | 0.680 | N/A | N/A | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.634 | N/A | N/A | d.110.4 | SNARE-like |
