| Protein: | CDR1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 437 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDR1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
296.0 | [0..18] | [432..4] |
|
Region A: Residues: [1-437] |
1 11 21 31 41 51
| | | | | |
1 MASLFSSVLL SLCLLSSLFL SNANAKPKLG FTADLIHRDS PKSPFYNPME TSSQRLRNAI 60
61 HRSVNRVFHF TEKDNTPQPQ IDLTSNSGEY LMNVSIGTPP FPIMAIADTG SDLLWTQCAP 120
121 CDDCYTQVDP LFDPKTSSTY KDVSCSSSQC TALENQASCS TNDNTCSYSL SYGDNSYTKG 180
181 NIAVDTLTLG SSDTRPMQLK NIIIGCGHNN AGTFNKKGSG IVGLGGGPVS LIKQLGDSID 240
241 GKFSYCLVPL TSKKDQTSKI NFGTNAIVSG SGVVSTPLIA KASQETFYYL TLKSISVGSK 300
301 QIQYSGSDSE SSEGNIIIDS GTTLTLLPTE FYSELEDAVA SSIDAEKKQD PQSGLSLCYS 360
361 ATGDLKVPVI TMHFDGADVK LDSSNAFVQV SEDLVCFAFR GSPSFSIYGN VAQMNFLVGY 420
421 DTVSKTVSFK PTDCAKM
|
| Detection Method: |  |
| Confidence: | 67.045757 |
| Match: | 2psgA |
| Description: | REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.01508543827677 | bayes_pls_golite062009 |
| hydrolase activity | 0.77554493777157 | bayes_pls_golite062009 |
| peptidase activity | 0.68518523369811 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.43925265235199 | bayes_pls_golite062009 |
| endopeptidase activity | 0.43264884039584 | bayes_pls_golite062009 |
| aspartic-type endopeptidase activity | 0.30585066730542 | bayes_pls_golite062009 |
| aspartic-type peptidase activity | 0.30585066730542 | bayes_pls_golite062009 |
