| Protein: | gi|220942256 |
| Organism: | synthetic construct |
| Length: | 338 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220942256.
| Description | E-value | Query Range |
Subject Range |
|
|
262.0 | [0..1] | [307..1] |
|
Region A: Residues: [1-211] |
1 11 21 31 41 51
| | | | | |
1 MGNDDHRRRK TPCGFCMAVF KWIPVLFITA VIAWSYYAYV VELCIRNSEN RIGMIFMLLF 60
61 YHLFLTLFMW SYWRTIMTSV GRIPDQWRIP DEEVSRLFRA DSPDTQKRIL NNFARDLPVT 120
121 NRTMNGSVRF CEKCKIIKPD RAHHCSVCSC CVLKMDHHCP WVNNCVNFYN YKYFVLFLGY 180
181 ALVYCLYVAF TSLHDFVEFW KVGAGQLNAS G
|
| Detection Method: |  |
| Confidence: | 1.04 |
| Match: | 1zbdB |
| Description: | Effector domain of rabphilin-3a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| histone acetyltransferase activity | 2.27787208911046 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 2.27787208911046 | bayes_pls_golite062009 |
| binding | 2.21365807674155 | bayes_pls_golite062009 |
| transporter activity | 1.33264421804057 | bayes_pls_golite062009 |
| protein binding | 1.22943142958169 | bayes_pls_golite062009 |
| phosphoinositide binding | 1.19034196920111 | bayes_pls_golite062009 |
| transcription regulator activity | 1.14293461071656 | bayes_pls_golite062009 |
| phospholipid binding | 1.09010543599677 | bayes_pls_golite062009 |
| DNA binding | 1.01821892002729 | bayes_pls_golite062009 |
| nucleic acid binding | 0.868529388780493 | bayes_pls_golite062009 |
| hydrolase activity | 0.697325409224408 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.674982339943257 | bayes_pls_golite062009 |
| protein transporter activity | 0.583047726565019 | bayes_pls_golite062009 |
| N-acyltransferase activity | 0.565596821175093 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 0.514633973697725 | bayes_pls_golite062009 |
| histone binding | 0.440372329067948 | bayes_pls_golite062009 |
| 0.308979985902751 | bayes_pls_golite062009 | |
| phosphatidylinositol binding | 0.251953910109229 | bayes_pls_golite062009 |
| transcription factor activity | 0.204306775436268 | bayes_pls_golite062009 |
| ligase activity | 0.161281682592326 | bayes_pls_golite062009 |
|
Region A: Residues: [212-338] |
1 11 21 31 41 51
| | | | | |
1 MGRFHILFLF FIAIMFAISL VSLFGYHIYL VLVNRTTLES FRAPIFRVGG PDKNGYNLGR 60
61 YANFCEVFGD DWQYWFLPVF SSFGDGKTFP IRHMEEDTES LLGYHSDTRI ELEEDFLPEP 120
121 RFQDSIP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
