| Protein: | gi|205350428, gi... |
| Organism: | Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066 |
| Length: | 638 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|205350428, gi....
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [1..638] | [1..638] |
|
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0.0 | [1..637] | [1..637] |
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0.0 | [1..637] | [1..637] |
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0.0 | [1..637] | [1..637] |
|
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0.0 | [1..637] | [1..637] |
|
|
0.0 | [1..637] | [1..637] |
|
|
0.0 | [1..637] | [1..637] |
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0.0 | [1..637] | [1..637] |
|
|
0.0 | [1..637] | [1..637] |
|
|
0.0 | [1..637] | [1..637] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MSSDIKIKVQ SFGRFLSNMV MPNIGAFIAW GIITALFIPT GWLPNETLAK LVGPMITYLL 60
61 PLLIGYTGGR LVGGERGGVV GAITTMGVIV GAD
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [94-336] |
1 11 21 31 41 51
| | | | | |
1 MPMFLGSMIA GPLGGYCIKK FDSWVDGKIK SGFEMLVNNF SAGIIGMILA ILAFLGIGPA 60
61 VEVLSKILAA GVNFMVAHDM LPLASIFVEP AKILFLNNAI NHGIFSPLGI QQSHEMGKSI 120
121 FFLIEANPGP GMGVLLAYMF FGRGSAKQSA GGAAIIHFLG GIHEIYFPYV LMNPRLILAV 180
181 ILGGMTGVFT LTILNGGLVS PASPGSILAV LAMTPKGAYF ANIAAIVAAM AVSFVVSAIL 240
241 LKT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [337-495] |
1 11 21 31 41 51
| | | | | |
1 SKVKEEDDIE AATRRMHDMK AESKGASPLA AGDVTNDLSH VRKIIVACDA GMGSSAMGAG 60
61 VLRKKVQDAG LSQISVTNSA INNLPPDVDL VITHRDLTER AMRQVPQAQH ISLTNFLDSG 120
121 LYTSLTERLV AAQRHNTNEE KVRDHLKDSF EEGDNNLFK
|
| Detection Method: | |
| Confidence: | 16.30103 |
| Match: | 1vkrA |
| Description: | STRUCTURE OF IIB DOMAIN OF THE MANNITOL-SPECIFIC PERMEASE ENZYME II |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [496-638] |
1 11 21 31 41 51
| | | | | |
1 LGAENIFLGR KAANKEEAIR FAGEQLVKGG YVEPEYVEAM LDREKLTPTY LGESIAVPHG 60
61 TVEAKDRVLK TGVVFCQYPE GVRFGEEEDD IARLVIGIAA RNNEHIQVIT SLTNALDDES 120
121 VIERLAHTTS VDEVLELLAG KKA
|
| Detection Method: | |
| Confidence: | 37.0 |
| Match: | 1a3aA |
| Description: | Phosphotransferase IIa-mannitol |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein-N(PI)-phosphohistidine-sugar phosphotransferase activity | 4.89047341597444 | bayes_pls_golite062009 |
| carbohydrate transmembrane transporter activity | 3.92377913213665 | bayes_pls_golite062009 |
| transporter activity | 2.16741930408232 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.05879816720019 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.87457143976439 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.82451780056478 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.7251575499811 | bayes_pls_golite062009 |
| binding | 0.396676636991646 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.19707628828681 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.12881601139602 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 0.10209580008722 | bayes_pls_golite062009 |
