Protein: | gi|190408648 |
Organism: | Saccharomyces cerevisiae RM11-1a |
Length: | 551 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190408648.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..551] | [1..551] |
|
3.0E-79 | [69..511] | [21..492] |
|
3.0E-68 | [7..366] | [249..618] |
|
6.0E-67 | [7..366] | [3..372] |
|
2.0E-66 | [7..366] | [3..372] |
|
2.0E-66 | [7..366] | [3..372] |
|
3.0E-66 | [7..366] | [3..372] |
|
3.0E-66 | [7..366] | [3..372] |
|
5.0E-66 | [7..366] | [3..372] |
Region A: Residues: [1-66] |
1 11 21 31 41 51 | | | | | | 1 MLKNFKLSKR DSNGSKGRIT SADISTPSHD NGSVIKHIKT VPVRYLSSSS TPVKSQRDSS 60 61 PKNRHN |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.366 | d.9.1 | Interleukin 8-like chemokines |
View | Download | 0.381 | d.74.2 | C-terminal domain of arginine repressor |
View | Download | 0.453 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
View | Download | 0.483 | d.17.3 | Disulfide bond isomerase, DsbC, N-terminal domain |
View | Download | 0.318 | d.9.2 | Description not found. |
View | Download | 0.295 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
View | Download | 0.295 | g.41.3 | Zinc beta-ribbon |
View | Download | 0.293 | b.34.5 | Translation proteins SH3-like domain |
View | Download | 0.266 | d.95.1 | Glucose permease domain IIB |
View | Download | 0.258 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
View | Download | 0.253 | c.47.1 | Thioredoxin-like |
View | Download | 0.240 | b.34.7 | DNA-binding domain of retroviral integrase |
View | Download | 0.239 | g.41.7 | Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain |
View | Download | 0.230 | g.41.3 | Zinc beta-ribbon |
View | Download | 0.220 | a.64.1 | Saposin |
Term | Confidence | Notes |
binding | 3.12724619324809 | bayes_pls_golite062009 |
signal transducer activity | 2.5284324342567 | bayes_pls_golite062009 |
molecular transducer activity | 2.5284324342567 | bayes_pls_golite062009 |
protein binding | 2.14586566310919 | bayes_pls_golite062009 |
molecular adaptor activity | 1.33740973673697 | bayes_pls_golite062009 |
SH3/SH2 adaptor activity | 1.2323381312171 | bayes_pls_golite062009 |
protein binding, bridging | 0.83823250804321 | bayes_pls_golite062009 |
cytoskeletal protein binding | 0.83493091348808 | bayes_pls_golite062009 |
actin filament binding | 0.75424908168927 | bayes_pls_golite062009 |
transcription regulator activity | 0.540818657754841 | bayes_pls_golite062009 |
enzyme regulator activity | 0.456661966897198 | bayes_pls_golite062009 |
nucleic acid binding | 0.352421112301971 | bayes_pls_golite062009 |
DNA binding | 0.281643350069021 | bayes_pls_golite062009 |
phosphoprotein binding | 0.16798254471727 | bayes_pls_golite062009 |
Region A: Residues: [67-133] |
1 11 21 31 41 51 | | | | | | 1 SKDITSPEKV IKAKYSYQAQ TSKELSFMEG EFFYVSGDEK DWYKASNPST GKEGVVPKTY 60 61 FEVFDRT |
Detection Method: | |
Confidence: | 91.24799 |
Match: | 2ptk__ |
Description: | c-src protein tyrosine kinase; c-src tyrosine kinase |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [134-238] |
1 11 21 31 41 51 | | | | | | 1 KPSSVNGSNS SSRKVTNDSL NMGSLYAIVL YDFKAEKADE LTTYVGENLF ICAHHNCEWF 60 61 IAKPIGRLGG PGLVPVGFVS IIDIATGYAT GNDVIEDIKS VNLPT |
Detection Method: | |
Confidence: | 91.24799 |
Match: | 2ptk__ |
Description: | c-src protein tyrosine kinase; c-src tyrosine kinase |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 2.24212855645397 | bayes_pls_golite062009 |
protein binding | 1.04550817342273 | bayes_pls_golite062009 |
signal transducer activity | 0.639296022362811 | bayes_pls_golite062009 |
molecular transducer activity | 0.639296022362811 | bayes_pls_golite062009 |
GTPase regulator activity | 0.459633124432679 | bayes_pls_golite062009 |
nucleoside-triphosphatase regulator activity | 0.457933659119243 | bayes_pls_golite062009 |
small GTPase regulator activity | 0.390993828682912 | bayes_pls_golite062009 |
enzyme regulator activity | 0.217422685675578 | bayes_pls_golite062009 |
phosphotransferase activity, alcohol group as acceptor | 0.187012142094005 | bayes_pls_golite062009 |
protein serine/threonine kinase activity | 0.0693380673720717 | bayes_pls_golite062009 |
protein kinase activity | 0.0278354564906339 | bayes_pls_golite062009 |
kinase activity | 0.00999242592237526 | bayes_pls_golite062009 |
Region A: Residues: [239-366] |
1 11 21 31 41 51 | | | | | | 1 VQEWKSNIAR YKASNISLGS VEQQQQQSIT KPQNKSAKLV DGELLVKASV ESFGLEDEKY 60 61 WFLVCCELSN GKTRQLKRYY QDFYDLQVQL LDAFPAEAGK LRDAGGQWSK RIMPYIPGPV 120 121 PYVTNSIT |
Detection Method: | |
Confidence: | 91.24799 |
Match: | 2ptk__ |
Description: | c-src protein tyrosine kinase; c-src tyrosine kinase |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [367-434] |
1 11 21 31 41 51 | | | | | | 1 KKRKEDLNIY VADLVNLPDY ISRSEMVHSL FVVLNNGFDR EFERDENQNN IKTLQENDTA 60 61 TFATASQT |
Detection Method: | |
Confidence: | 77.156545 |
Match: | 1gd5A_ |
Description: | p47phox NADPH oxidase |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [435-551] |
1 11 21 31 41 51 | | | | | | 1 SNFASTNQDN TLTGEDLKLN KKLSDLSLSG SKQAPAQSTS GLKTTKIKFY YKDDIFALML 60 61 KGDTTYKELR SKIAPRIDTD NFKLQTKLFD GSGEEIKTDS QVSNIIQAKL KISVHDI |
Detection Method: | |
Confidence: | 405.144602 |
Match: | 1ip9A_ |
Description: | Bud emergence mediator Bemp1 |
Matching Structure (courtesy of the PDB): |