| Protein: | gi|220943764 |
| Organism: | synthetic construct |
| Length: | 778 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220943764.
| Description | E-value | Query Range |
Subject Range |
|
|
867.0 | [0..1] | [777..1] |
|
Region A: Residues: [1-147] |
1 11 21 31 41 51
| | | | | |
1 MAGDDLIAKF QALGMSEQKA KETLKNANVT KNLQLSLAAA GSATLSDGTG MLIYHMATKL 60
61 KPQTADHLPL LVRYIVEHKL DNTQRVDAAL EYLLKCGQSL NANIDLQALE KECGVGVVVT 120
121 PEQIERTVQA KIKASYKEAL LEQRYHF
|
| Detection Method: |  |
| Confidence: | 92.657577 |
| Match: | PF04558.6 |
| Description: | No description for PF04558.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [148-249] |
1 11 21 31 41 51
| | | | | |
1 NSFKILQDVR GELKWADAKS VKAAIDVEIF DLLGPKTEAD LKPQTKANDK PKAAKPKAEV 60
61 TPAAQTAEAA SDGATTISEL MKTKVHFHAP GENFKADGYV VT
|
| Detection Method: | |
| Confidence: | 14.0 |
| Match: | 1iq0A |
| Description: | Arginyl-tRNA synthetase (ArgRS); Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [250-778] |
1 11 21 31 41 51
| | | | | |
1 EHTERLLKEH LARTGGKVHT RFPPEPNGIL HIGHAKAINI NFGYAAAHDG VCYLRYDDTN 60
61 PEKEEEKFFL AIKEMVEWLG YKPFKITYSS DNFQQLYEWA VVLINKGLAY VCHQKAEELK 120
121 GFNPKPSPWR ERPIEESLRL FEDMKRGKID EGAATLRMKV TLEEGKMDPV AYRIKFISHH 180
181 RTGSDWCIYP TYDYTHCLCD SLEDITHSLC TKEFQSRRSS YYWLCNALGI YCPVQWEYGR 240
241 LNMNYALVSK RKIAKLITEQ IVHDWDDPRL FTLTALRRRG FPAEAINNFC AQMGVTGAQI 300
301 AVDPAMLEAA VRDVLNVTAP RRLVVLEPLK VTIKNFPHAA PVQLEVPDFP QNPQQGTHKI 360
361 TLDKVIYIEQ GDFKLEPEKG YRRLAPKQSV GLRHAGLVIS VDEIVKDPAT GQVVELICTS 420
421 QPAEQAEKPK AFVQWVSQPI QLEVRLYEQL FKHKNPEDPN EVPGGFLSDI SEQSMSVVVA 480
481 FADRALNQAK VYDKFQFERI GFFSVDPDTS ANHLVFNRTV GLKEDAGKK
|
| Detection Method: | |
| Confidence: | 171.0 |
| Match: | 1o0bA |
| Description: | Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain; Glutaminyl-tRNA synthetase (GlnRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| glutamine-tRNA ligase activity | 7.66556935228325 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.16276509815667 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.16276509815667 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.13957775963187 | bayes_pls_golite062009 |
| ligase activity | 6.11211476973434 | bayes_pls_golite062009 |
| lysine-tRNA ligase activity | 4.64665624411373 | bayes_pls_golite062009 |
| structural constituent of ribosome | 4.61484562096458 | bayes_pls_golite062009 |
| structural molecule activity | 4.261982318682 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 2.63681738794687 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| 5S rRNA binding | 2.25646775578129 | bayes_pls_golite062009 |
| rRNA binding | 2.12571610259264 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 2.01261843164558 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 1.88984817882585 | bayes_pls_golite062009 |
| tryptophan-tRNA ligase activity | 1.14187887833901 | bayes_pls_golite062009 |
| arginine-tRNA ligase activity | 1.13743634264647 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.06535308346284 | bayes_pls_golite062009 |
| cysteine-tRNA ligase activity | 0.844943947059557 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.625793556381714 | bayes_pls_golite062009 |
| binding | 0.47302762432927 | bayes_pls_golite062009 |
| nucleic acid binding | 0.161799496958314 | bayes_pls_golite062009 |
