| Protein: | gi|190406949 |
| Organism: | Saccharomyces cerevisiae RM11-1a |
| Length: | 237 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190406949.
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [1..237] | [1..237] |
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0.0 | [1..220] | [30..246] |
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0.0 | [1..220] | [30..246] |
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2.0E-91 | [1..218] | [1..214] |
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8.0E-61 | [20..217] | [19..204] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MANSKFGYVR QFETHDVILP QCYIVVRIDG KKFHEFSKFY EFAKPNDENA LKLMNACAKN 60
61 LVLKYKNDII LAFGESDEYS FILKS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.427 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.593 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.542 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.473 | d.68.7 | R3H domain |
| View | Download | 0.500 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.454 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.675 | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.627 | d.58.49 | YajQ-like |
| View | Download | 0.461 | d.58.2 | Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain |
| View | Download | 0.479 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.445 | d.68.3 | SirA-like |
| View | Download | 0.439 | d.58.2 | Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain |
| View | Download | 0.431 | d.58.5 | GlnB-like |
| View | Download | 0.410 | d.58.49 | YajQ-like |
| View | Download | 0.403 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.397 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.376 | d.67.2 | Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
| View | Download | 0.370 | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.368 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.367 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.365 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.361 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.360 | a.2.3 | Chaperone J-domain |
| View | Download | 0.359 | d.95.2 | Homing endonucleases |
| View | Download | 0.357 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.354 | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.344 | d.74.5 | Hypothetical protein Yml108w |
| View | Download | 0.343 | d.206.1 | YggU-like |
| View | Download | 0.343 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.338 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.334 | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.334 | d.68.4 | YhbY-like |
| View | Download | 0.333 | d.58.14 | Ribosomal protein S6 |
| View | Download | 0.327 | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.318 | d.13.1 | HIT-like |
| View | Download | 0.315 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.307 | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.290 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.288 | a.3.1 | Cytochrome c |
| View | Download | 0.285 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.284 | a.2.3 | Chaperone J-domain |
| View | Download | 0.283 | a.2.3 | Chaperone J-domain |
| View | Download | 0.282 | a.4.1 | Homeodomain-like |
| View | Download | 0.282 | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.277 | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.277 | a.4.1 | Homeodomain-like |
| View | Download | 0.269 | a.39.1 | EF-hand |
| View | Download | 0.265 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.264 | d.58.13 | Anticodon-binding domain of PheRS |
| View | Download | 0.262 | d.67.2 | Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
| View | Download | 0.259 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.258 | a.2.3 | Chaperone J-domain |
| View | Download | 0.256 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.256 | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.254 | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.254 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.253 | c.95.1 | Thiolase-like |
| View | Download | 0.253 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.249 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.247 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.243 | d.74.5 | Hypothetical protein Yml108w |
| View | Download | 0.243 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.235 | a.126.1 | Serum albumin-like |
| View | Download | 0.235 | a.126.1 | Serum albumin-like |
| View | Download | 0.234 | d.206.1 | YggU-like |
| View | Download | 0.233 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.232 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.230 | a.2.3 | Chaperone J-domain |
| View | Download | 0.229 | a.4.1 | Homeodomain-like |
| View | Download | 0.224 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.224 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.221 | c.110.1 | D-Tyr tRNAtyr deacylase, DTD |
| View | Download | 0.219 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.218 | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.217 | a.29.2 | Bromodomain |
| View | Download | 0.216 | a.74.1 | Cyclin-like |
| View | Download | 0.214 | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.210 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.209 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.208 | c.55.4 | Translational machinery components |
| View | Download | 0.206 | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.206 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.204 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.204 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.203 | a.22.1 | Histone-fold |
| View | Download | 0.202 | d.13.1 | HIT-like |
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Region A: Residues: [86-237] |
1 11 21 31 41 51
| | | | | |
1 STTLFNRRKD KLATLFGSFF TSNYVALWAK FFPEKPLNIK HLPYFDSRCV AYPNLQTIKD 60
61 YLSWRYVDTH INNLYNTTFW QLIIKCGLTP QESEKKLCGT FSNEKQEILF SECGINYNNE 120
121 PEMFKKGSLV TRKGEILHIN VIAQIDELFE GY
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.297 | 0.984 | tRNA modification | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.265 | 0.003 | cytoplasm | a.1.1 | Globin-like |
| View | Download | 0.247 | 0.000 | nucleus | d.107.1 | Ran-binding protein mog1p |
| View | Download | 0.266 | 0.000 | tRNA modification | a.47.2 | t-snare proteins |
| View | Download | 0.228 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.217 | N/A | N/A | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
