| Protein: | gi|221325349 |
| Organism: | Bacillus subtilis subsp. subtilis str. SMY |
| Length: | 641 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221325349.
| Description | E-value | Query Range |
Subject Range |
|
|
396.0 | [0..1] | [637..1] |
|
Region A: Residues: [1-147] |
1 11 21 31 41 51
| | | | | |
1 MLHGRLRDIL RLLMAAEAPV TSSFFAAQLN VTTRTVRNDI KELQGVLSGH GAFVQSVRGS 60
61 GYKLRIDDEQ VFRTLLQDEF QQKKGLPVLP EERMAYLMKR LLLADHYLKL DELAEELFIS 120
121 KSTLQTDLKE VKKRLLPYRI VMETRPN
|
| Detection Method: |  |
| Confidence: | 2.02 |
| Match: | 1j5yA |
| Description: | Putative transcriptional regulator TM1602, N-terminal domain; Putative transcriptional regulator TM1602, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.67519658226073 | bayes_pls_golite062009 |
| DNA binding | 3.1229077545522 | bayes_pls_golite062009 |
| nucleic acid binding | 3.10431747895367 | bayes_pls_golite062009 |
| transcription factor activity | 2.49694475728018 | bayes_pls_golite062009 |
| binding | 2.03697617454396 | bayes_pls_golite062009 |
| transcription activator activity | 0.293284204935948 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.266645609122554 | bayes_pls_golite062009 |
| transcription repressor activity | 0.259857063944388 | bayes_pls_golite062009 |
| protein binding | 0.00796693091603284 | bayes_pls_golite062009 |
|
Region A: Residues: [148-402] |
1 11 21 31 41 51
| | | | | |
1 YGFKLRGDEV QMRYCMAEYI VDERETEIDV LNEKADILPK EEIEIIRSAI LKKMKNDRIP 60
61 LSNMGLNNLI IHIAIACKRI RTENYVSLFP KDMDHILHQK EYQAAEAIVK ELESKLSVTF 120
121 PKDETAYITM HLLGTKRMTQ SQCGEDTFSI EEETDQLTLA MIKAVDRELK LGILHDKELK 180
181 IGLALHMKPA ISRNRYGMNL RNPMLAAIKE HYPLAFEAGI IAGIVIKEQT GIEIHENEIG 240
241 YLALHFGAAI ERKKT
|
| Detection Method: | |
| Confidence: | 33.30103 |
| Match: | 1tlvA |
| Description: | Structure of the native and inactive LicT PRD from B. subtilis |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.56369131794526 | bayes_pls_golite062009 |
| transcription antiterminator activity | 1.04498481068613 | bayes_pls_golite062009 |
|
Region A: Residues: [403-496] |
1 11 21 31 41 51
| | | | | |
1 ESPPKRCIIV CASGAGSAQL LREKLRSHFG KRLDILGTAE YYSLDQMSYE SIDFVISTIP 60
61 IKKELPVPVL KVNTILGGTD FTKIESILSD EKEK
|
| Detection Method: | |
| Confidence: | 3.2 |
| Match: | 1tvmA |
| Description: | NMR structure of enzyme GatB of the galactitol-specific phosphoenolpyruvate-dependent phosphotransferase system |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [497-641] |
1 11 21 31 41 51
| | | | | |
1 ANRYLKKELV FFQEDLRSKE EVIQFLGQKV VECGFADEEI IDSIFEREDM SPTCFGNLVA 60
61 IPHPLVPQTK TTFWAVCTLK KPIDWESQRV QFVCLLCVEK ENKADLQSMY KLLGSILDDP 120
121 AAMNQLIKCR SYQELSDVFD QKMLS
|
| Detection Method: | |
| Confidence: | 24.045757 |
| Match: | 1a6jA |
| Description: | Nitrogen regulatory bacterial protein IIa-ntr |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 0.789390286938302 | bayes_pls_golite062009 |
| catalytic activity | 0.547925219495929 | bayes_pls_golite062009 |
| binding | 0.396676636991646 | bayes_pls_golite062009 |
