| Protein: | gi|168275840 |
| Organism: | synthetic construct |
| Length: | 824 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|168275840.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-89 | [17..823] | [89..885] |
|
|
6.0E-89 | [19..823] | [171..964] |
|
|
8.0E-89 | [20..823] | [751..1536] |
|
|
3.0E-78 | [1..824] | [1..824] |
|
|
4.0E-78 | [1..824] | [1..824] |
|
|
1.0E-77 | [1..824] | [1..824] |
|
|
3.0E-77 | [355..824] | [150..619] |
|
|
4.0E-77 | [13..823] | [1352..2157] |
|
Region A: Residues: [1-288] |
1 11 21 31 41 51
| | | | | |
1 MTVLQEPVQA AIWQALNHYA YRDAVFLAER LYAEVHSEEA LFLLATCYYR SGKAYKAYRL 60
61 LKGHSCTTPQ CKYLLAKCCV DLSKLAEGEQ ILSGGVFNKQ KSHDDIVTEF GDSACFTLSL 120
121 LGHVYCKTDR LAKGSECYQK SLSLNPFLWS PFESLCEIGE KPDPDQTFKF TSLQNFSNCL 180
181 PNSCTTQVPN HSLSHRQPET VLTETPQDTI ELNRLNLESS NSKYSLNTDS SVSYIDSAVI 240
241 SPDTVPLGTG TSILSKQVQN KPKTGRSLLG GPAALSPLTP SFGILPLE
|
| Detection Method: |  |
| Confidence: | 2.54 |
| Match: | 2gw1A |
| Description: | No description for 2gw1A was found. |
|
Region A: Residues: [289-369] |
1 11 21 31 41 51
| | | | | |
1 TPSPGDGSYL QNYTNTPPVI DVPSTGAPSK KSVARIGQTG TKSVFSQSGN SREVTPILAQ 60
61 TQSSGPQTST TPQVLSPTIT S
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [370-824] |
1 11 21 31 41 51
| | | | | |
1 PPNALPRRSS RLFTSDSSTT KENSKKLKMK FPPKIPNRKT KSKTNKGGIT QPNINDSLEI 60
61 TKLDSSIISE GKISTITPQI QAFNLQKAAA EGLMSLLREM GKGYLALCSY NCKEAINILS 120
121 HLPSHHYNTG WVLCQIGRAY FELSEYMQAE RIFSEVRRIE NYRVEGMEIY STTLWHLQKD 180
181 VALSVLSKDL TDMDKNSPEA WCAAGNCFSL QREHDIAIKF FQRAIQVDPN YAYAYTLLGH 240
241 EFVLTEELDK ALACFRNAIR VNPRHYNAWY GLGMIYYKQE KFSLAEMHFQ KALDINPQSS 300
301 VLLCHIGVVQ HALKKSEKAL DTLNKAIVID PKNPLCKFHR ASVLFANEKY KSALQELEEL 360
361 KQIVPKESLV YFLIGKVYKK LGQTHLALMN FSWAMDLDPK GANNQIKEAI DKRYLPDDEE 420
421 PITQEEQIMG TDESQESSMT DADDTQLHAA ESDEF
|
| Detection Method: | |
| Confidence: | 56.045757 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.52126334054344 | bayes_pls_golite062009 |
| protein binding | 1.52807685989528 | bayes_pls_golite062009 |
| hydrolase activity | 0.73439282112774 | bayes_pls_golite062009 |
| enzyme binding | 0.44905827271946 | bayes_pls_golite062009 |
| nucleic acid binding | 0.41706917101675 | bayes_pls_golite062009 |
| transcription regulator activity | 0.322371143360832 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.244038930707726 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.215617899962405 | bayes_pls_golite062009 |
| DNA binding | 0.17736976899009 | bayes_pls_golite062009 |
