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View Structure Prediction Details

Protein: gi|221312978
Organism: Bacillus subtilis subsp. subtilis str. NCIB 3610
Length: 449 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221312978.

Description E-value Query
Range
Subject
Range
gi|52002498, gi|... - gi|52784653|ref|YP_090482.1| MalA [Bacillus licheniformis ATCC 14580], gi|52347155|gb|AAU39789.1| Ma...
384.0 [0..2] [441..1]

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Predicted Domain #1
Region A:
Residues: [1-449]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKSFSIVI AGGGSTFTPG IVLMLLDHLE EFPIRKLKLY DNDKERQDRI AGACDVFIRE  60
   61 KAPDIEFAAT TDPEEAFTDV DFVMAHIRVG KYAMRALDEQ IPLKYGVVGQ ETCGPGGIAY 120
  121 GMRSIGGVLE ILDYMEKYSP DAWMLNYSNP AAIVAEATRR LRPNSKILNI CDMPVGIEDR 180
  181 MAQILGLSSR KEMKVRYYGL NHFGWWTSIQ DQEGNDLMPK LKEHVSQYGY IPKTEAEAVE 240
  241 ASWNDTFAKA RDVQAADPDT LPNTYLQYYL FPDDMVKKSN PNHTRANEVM EGREAFIFSQ 300
  301 CDMITREQSS ENSEIKIDDH ASYIVDLARA IAYNTGERML LIVENNGAIA NFDPTAMVEV 360
  361 PCIVGSNGPE PITVGTIPQF QKGLMEQQVS VEKLTVEAWA EKSFQKLWQA LILSKTVPNA 420
  421 RVARLILEDL VEANKDFWPE LDQSPTRIS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 106.0
Match: 1u8xX
Description: CRYSTAL STRUCTURE OF GLVA FROM BACILLUS SUBTILIS, A METAL-REQUIRING, NAD-DEPENDENT 6-PHOSPHO-ALPHA-GLUCOSIDASE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.04073391751087 bayes_pls_golite062009
lactate dehydrogenase activity 0.87934022340198 bayes_pls_golite062009
oxidoreductase activity 0.801369736578234 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 0.800162074505462 bayes_pls_golite062009
L-lactate dehydrogenase activity 0.62197650488981 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 0.207367749250588 bayes_pls_golite062009
malate dehydrogenase activity 0.0457268286491508 bayes_pls_golite062009
L-malate dehydrogenase activity 0.0199505659839099 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle