| Protein: | gi|207347506 |
| Organism: | Saccharomyces cerevisiae AWRI1631 |
| Length: | 450 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|207347506.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..450] | [1..450] |
|
|
3.0E-43 | [4..272] | [6..286] |
|
|
2.0E-38 | [16..272] | [3..284] |
|
|
6.0E-36 | [17..272] | [3..281] |
|
|
9.0E-35 | [19..255] | [29..278] |
|
|
5.0E-31 | [1..232] | [1..243] |
|
|
6.0E-31 | [1..232] | [1..243] |
|
|
1.0E-29 | [5..236] | [30..237] |
|
|
1.0E-29 | [4..253] | [27..261] |
|
Region A: Residues: [1-115] |
1 11 21 31 41 51
| | | | | |
1 MVNSKRQQRS KKVASSSKVP PTKGRTFTGC WACRFKKRRC DENRPICSLC AKHGDNCSYD 60
61 IRLMWLEENI YKVRKHSLIS SLQARKSKSK PLCQKISKSR FKQMTHFRQL SPPTS
|
| Detection Method: |  |
| Confidence: | 11.39794 |
| Match: | 1pyiA_ |
| Description: | PPR1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.56444258780502 | bayes_pls_golite062009 |
| DNA binding | 4.26146437716972 | bayes_pls_golite062009 |
| nucleic acid binding | 4.17369933547911 | bayes_pls_golite062009 |
| transcription factor activity | 3.049435548132 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.98081393153291 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.93914501897006 | bayes_pls_golite062009 |
| binding | 2.91929847152301 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 2.44382866473054 | bayes_pls_golite062009 |
| transcription activator activity | 2.24483536326713 | bayes_pls_golite062009 |
|
Region A: Residues: [116-450] |
1 11 21 31 41 51
| | | | | |
1 DCEDSVHEAS KETTLPNDNT FTISVRRLKI YNNAVASVFG SMTNRDYTQK RIDKKLDELL 60
61 NMVENDISVV NLNCSKHGPY SVFRANPAAV TSALTDQLPS PGHSMSSAEE TTTAALSSPP 120
121 EDSTSLIDII QGKIFGILWF NCYGNMILNR QEYTTWFINK MRNSLTTEFI RFLGKIIDDP 180
181 DINMASCLFK ECIARWSCVD WQSIAITMLV IIHGYTCPNL TKLLRVWFLQ QKLLRFSMYP 240
241 LVNFIINNTQ DLDVLYHCNG LLGNADLFED PYQDELTSEL HVLVTERLVN SWKDTILQQL 300
301 CSCQDTTLSC SQLRYWQLQL KCNQQFYKDV YAMQD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [259-450] |
1 11 21 31 41 51
| | | | | |
1 GNMILNRQEY TTWFINKMRN SLTTEFIRFL GKIIDDPDIN MASCLFKECI ARWSCVDWQS 60
61 IAITMLVIIH GYTCPNLTKL LRVWFLQQKL LRFSMYPLVN FIINNTQDLD VLYHCNGLLG 120
121 NADLFEDPYQ DELTSELHVL VTERLVNSWK DTILQQLCSC QDTTLSCSQL RYWQLQLKCN 180
181 QQFYKDVYAM QD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
