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View Structure Prediction Details

Protein: gi|221323680
Organism: Bacillus subtilis subsp. subtilis str. SMY
Length: 325 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221323680.

Description E-value Query
Range
Subject
Range
gi|52080752, gi|... - gi|52786123|ref|YP_091952.1| hypothetical protein BLi02379 [Bacillus licheniformis ATCC 14580], gi|5...
329.0 [0..1] [322..1]

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Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSTLRKDLI ELFSQAGNEF ISGQKISDAL GCSRTAVWKH IEELRKEGYE VEAVRRKGYR  60
   61 LIKKPGKLSE SEIRFGLKTE VMGQHLIYHD VLSSTQKTAH ELANNNAPEG TLVVADKQTA 120
  121 GRGRMSRVWH SQEGNGVWMS LILRPDIPLQ KTPQLTLLAA VAVVQGIEEA AGIQTDIKWP 180
  181 NDILINGKKT VGILTEMQAE EDRVRSVIIG IGINVNQQPN DFPDELKDIA TSLSQAAGEK 240
  241 IDRAGVIQHI LLCFEKRYRD YMTHGFTPIK LLWESYALGI GTNMRARTLN GTFYGKALGI 300
  301 DDEGVLLLET NEGIKKIYSA DIELG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.0
Match: 1biaA
Description: THE E. COLI BIOTIN HOLOENZYME SYNTHETASE(SLASH)BIO REPRESSOR CRYSTAL STRUCTURE DELINEATES THE BIOTIN AND DNA-BINDING DOMAINS
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ligase activity, forming carbon-oxygen bonds 3.33073922220594 bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds 3.33073922220594 bayes_pls_golite062009
aminoacyl-tRNA ligase activity 3.33034630936933 bayes_pls_golite062009
ligase activity 3.05852492533937 bayes_pls_golite062009
catalytic activity 2.36416267096403 bayes_pls_golite062009
biotin-[acetyl-CoA-carboxylase] ligase activity 1.84290209862678 bayes_pls_golite062009
biotin-protein ligase activity 1.84290209862678 bayes_pls_golite062009
transcription activator activity 0.53294679084865 bayes_pls_golite062009
sequence-specific DNA binding 0.53285802828572 bayes_pls_golite062009
transcription regulator activity 0.514652697234715 bayes_pls_golite062009
nucleic acid binding 0.268902262140417 bayes_pls_golite062009
binding 0.204413263196103 bayes_pls_golite062009
DNA binding 0.114801541522161 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle