| Protein: | gi|45935021, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 339 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|45935021, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
161.0 | [0..1] | [339..1] |
|
|
149.0 | [0..7] | [338..35] |
|
|
146.0 | [0..7] | [338..35] |
|
|
145.0 | [0..7] | [338..35] |
|
|
140.0 | [0..7] | [338..35] |
|
|
138.0 | [0..7] | [338..35] |
|
Region A: Residues: [1-173] |
1 11 21 31 41 51
| | | | | |
1 MSDKDEFAAK KKDLVNTPVD LYPPENPMLG PSPMMDSFRE TLWHDGGFNV HTDADTSFRD 60
61 STGLFLQDTQ IPSGSKLDNG PLTDASKLVK ERSINNVSED SQSSGGNGHD DAKCGQTSSK 120
121 GFSSKKRKRI GKDCEEEEDK KQKDEQSPTS NANKTNSEKQ PSDSLKDGYI HMR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [174-255] |
1 11 21 31 41 51
| | | | | |
1 ARRGQATNSH SLAERVRREK ISERMKFLQD LVPGCDKVTG KAVMLDEIIN YVQSLQCQIE 60
61 FLSMKLSAVN PVLDFNLESL LA
|
| Detection Method: | |
| Confidence: | 19.522879 |
| Match: | 1am9A |
| Description: | SREBP-1a |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [256-339] |
1 11 21 31 41 51
| | | | | |
1 KDALQSSAPT FPHNMSMLYP PVSYLSQTGF MQPNISSMSL LSGGLKRQET HGYESDHHNL 60
61 VHMNHETGTA PDHEDTTADM KVEP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
