YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|45935021, gi|...

General Information:
Name(s) found: gi|79318615 [NCBI NR]
gi|46367460 [NCBI NR]
gi|45935021 [NCBI NR]
Description(s) found:
Found 12 descriptions.
SHOW ALL
  • gi|79318615|ref|NP_001031093.1| CIB5 (CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 5); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 339 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDKDEFAAK KKDLVNTPVD LYPPENPMLG PSPMMDSFRE TLWHDGGFNV HTDADTSFRD  60
   61 STGLFLQDTQ IPSGSKLDNG PLTDASKLVK ERSINNVSED SQSSGGNGHD DAKCGQTSSK 120
  121 GFSSKKRKRI GKDCEEEEDK KQKDEQSPTS NANKTNSEKQ PSDSLKDGYI HMRARRGQAT 180
  181 NSHSLAERVR REKISERMKF LQDLVPGCDK VTGKAVMLDE IINYVQSLQC QIEFLSMKLS 240
  241 AVNPVLDFNL ESLLAKDALQ SSAPTFPHNM SMLYPPVSYL SQTGFMQPNI SSMSLLSGGL 300
  301 KRQETHGYES DHHNLVHMNH ETGTAPDHED TTADMKVEP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..173] MSA 1.607993 View MSA. No confident structure predictions are available.
    2 View Details [174..255] PSI-BLAST 19.522879 SREBP-1a
    3 View Details [256..339] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle