| Protein: | gi|45752676, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 209 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|45752676, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
167.0 | [0..116] | [201..156] |
|
Region A: Residues: [1-110] |
1 11 21 31 41 51
| | | | | |
1 MNEERPKKSK KKSLMNFYKF SITSSKHSLI NPKSKPKIPI STPSISQQEV EEKPIVQSNK 60
61 SHQNHVMRDI FELETTCSRN NERKKGGGAA EEGRKSVSHV ERDTAARIEA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.355 | a.29.2 | Bromodomain |
| View | Download | 0.218 | a.134.1 | Fungal elicitin |
| View | Download | 0.207 | a.24.17 | Group V grass pollen allergen |
|
Region A: Residues: [111-209] |
1 11 21 31 41 51
| | | | | |
1 AAEMLTVRIL AADMPGFMQA HAFRCARMTL DSLEKFSSKH MAFNLKKEFD KGYGPAWHCI 60
61 VGSSFGSFVT HSTGCFIYFS MDKLYVLLFK TKVRPASPH
|
| Detection Method: | |
| Confidence: | 40.39794 |
| Match: | 1re6A |
| Description: | Localisation of Dynein Light Chains 1 and 2 and their Pro-apoptotic Ligands |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| microtubule motor activity | 9.69298846835381 | bayes_pls_golite062009 |
| motor activity | 5.85494716006373 | bayes_pls_golite062009 |
| dynein intermediate chain binding | 4.30226487277718 | bayes_pls_golite062009 |
| nitric-oxide synthase regulator activity | 3.06572632418145 | bayes_pls_golite062009 |
| dynein binding | 2.90318309608701 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.8232927372914 | bayes_pls_golite062009 |
| binding | 2.04793419379986 | bayes_pls_golite062009 |
| protein binding | 1.75479345161448 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 1.47503021587966 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.40860884968216 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 1.39154744890125 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.38919307572739 | bayes_pls_golite062009 |
| ATPase activity, coupled | 1.01610422569891 | bayes_pls_golite062009 |
| ATPase activity | 0.96367371812709 | bayes_pls_golite062009 |
| catalytic activity | 0.448769452796145 | bayes_pls_golite062009 |
| hydrolase activity | 0.442050017414837 | bayes_pls_golite062009 |
| protein dimerization activity | 0.257276734446829 | bayes_pls_golite062009 |
