| Protein: | XRN3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1020 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XRN3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1023.0 | [0..1] | [755..1] |
|
|
990.0 | [0..1] | [961..149] |
|
|
989.0 | [0..1] | [961..65] |
|
|
987.0 | [0..1] | [961..1] |
|
|
987.0 | [0..1] | [961..1] |
|
|
987.0 | [0..1] | [961..1] |
|
|
986.0 | [0..1] | [961..1] |
|
|
984.0 | [0..1] | [961..1] |
|
Region A: Residues: [1-161] |
1 11 21 31 41 51
| | | | | |
1 MGVPSFYRWL AEKYPLLVAD VIEEEPVEIE GIKIPVDTSK PNPNNLEYDN LYLDMNGIIH 60
61 PCFHPEDRPS PTTFEEVFQC MFDYIDRLFV MVRPRKLLYM AIDGVAPRAK MNQQRSRRFR 120
121 SAKDASDAAA EEERLREEFE REGRRLPPKV DSQVFDSNVI T
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [162-403] |
1 11 21 31 41 51
| | | | | |
1 PGTEFMGVLS IALQYYVHLR LNHDVGWKNI KVILSDANVP GEGEHKIMSY IRLQRNLPGF 60
61 DPNTRHCLYG LDADLIMLGL ATHEVHFSIL REVVYTPGQQ ERCFLCGQMG HFASNCEGKP 120
121 KKRAGESDEK GDGNDFVKKP YQFLHIWVLR EYLELEMRIP NPPFEIDLER IVDDFIFICF 180
181 FVGNDFLPHM PTLEIREGAI NLLMAVYKKE FRSFDGYLTD GCKPNLKRVE QFIQAVGSFE 240
241 DK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [404-526] |
1 11 21 31 41 51
| | | | | |
1 IFQKRAMQHQ RQAERVKRDK AGKATKRMDD EAPTVQPDLV PVARFSGSRL ASAPTPSPFQ 60
61 SNDGRSAPHQ KVRRLSPGSS VGAAIVDVEN SLESDERENK EELKTKLKEL IREKSDAFNS 120
121 DTT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [527-672] |
1 11 21 31 41 51
| | | | | |
1 EEDKVKLGQP GWRERYYEEK FSVVTPEEME RVRKDVVLKY TEGLCWVMHY YMEGVCSWQW 60
61 FYPYHYAPFA SDLKDLGEMD IKFELGTPFK PFNQLLGVFP AASSHALPER YRTLMTDPNS 120
121 PIIDFYPTDF EVDMNGKRFS WQGIAK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [673-1020] |
1 11 21 31 41 51
| | | | | |
1 LPFIDERRLL EAVSEVEFTL TDEEKRRNSR MCDMLFIATS HRLAELVFSL DNHCRQLSAR 60
61 ERVDFKVKIK PKLSDGMNGY LTPCSGETHP PVFRSPMEGM EDILTNQVIC CIYRLPDAHE 120
121 HITRPPPGVI FPKKTVDIGD LKPPPALWHE DNGRRPMHNN HGMHNNHGMH NNQGRQNPPG 180
181 SVSGRHLGNA AHRLVSNSLQ MGTDRYQTPT DVPAPGYGYN PPQYVPPIPY QHGGYMAPPG 240
241 AQGYAQPAPY QNRGGYQPRG PSGRFPSEPY QSQSREGQHA SRGGGYSGNH QNQHQQQQWH 300
301 GQGGSEQNNP RGYNGQHHHQ QGGDHDRRGR GRGSHHHHDQ GGNPRHRY
|
| Detection Method: | |
| Confidence: | 25.221849 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
