| Protein: | NTH2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 386 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NTH2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
327.0 | [0..1] | [371..1] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MILTGAASTF PIVARVLNAM NRRMYAATTL SSAKSISAES LNLRSDSNSE AAHGASESET 60
61 RVSLRKKRIK QDDLEPVKKC SARETKARKD MCGLPDIEDS PYKKTNGTAS SRTRKLNSYI 120
121 KSTEASPSAS SIKTAGLG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [139-386] |
1 11 21 31 41 51
| | | | | |
1 IPPENWEKVL EGIRKMKPSE EAPVNAVECD RTGSFLPPKE RRFYVLIGTL LSSQTKEHIT 60
61 GAAVERLHQN GLLTPEAIDK ADESTIKELI YPVGFYTRKA TNVKKVAKIC LMEYDGDIPR 120
121 TLEELLSLPG VGPKIAHLVL HVAWNDVQGI CVDTHVHRIC NRLGWVSKPG TKQKTSSPEE 180
181 TRVALQQWLP KGEWVAINFL LVGFGQTICT PLRPHCGTCS ITEICPSAFK ETPSTSSKLK 240
241 KSIKSKKL
|
| Detection Method: | |
| Confidence: | 57.221849 |
| Match: | 1ornA |
| Description: | Endonuclease III |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA N-glycosylase activity | 4.08559331236111 | bayes_pls_golite062009 |
| hydrolase activity, hydrolyzing N-glycosyl compounds | 3.73234184319832 | bayes_pls_golite062009 |
| DNA-(apurinic or apyrimidinic site) lyase activity | 3.12421941323765 | bayes_pls_golite062009 |
| hydrolase activity, acting on glycosyl bonds | 2.54759386266723 | bayes_pls_golite062009 |
| catalytic activity | 2.50389926428623 | bayes_pls_golite062009 |
| oxidized base lesion DNA N-glycosylase activity | 1.80199518353554 | bayes_pls_golite062009 |
| alkylbase DNA N-glycosylase activity | 1.75218522602775 | bayes_pls_golite062009 |
| hydrolase activity | 1.39000450534744 | bayes_pls_golite062009 |
| DNA-3-methyladenine glycosylase I activity | 1.14337995879633 | bayes_pls_golite062009 |
| oxidized purine base lesion DNA N-glycosylase activity | 0.473206156100251 | bayes_pls_golite062009 |
| uracil DNA N-glycosylase activity | 0.29478804124408 | bayes_pls_golite062009 |
| oxidized pyrimidine base lesion DNA N-glycosylase activity | 0.253198605718519 | bayes_pls_golite062009 |
