| Protein: | gi|15221363 |
| Organism: | Arabidopsis thaliana |
| Length: | 994 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15221363.
| Description | E-value | Query Range |
Subject Range |
|
|
926.0 | [0..1] | [994..1] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MDQGRQVFSV DLLERYATKN RGMITCMAAG NDVIVLGTSK GWIIRYDFGV GSSNDIDLAV 60
61 GRTGEQSIHK VFVDPGGSHC IATVTGVGGA ETFYTHAKWL KPRVLSRLKG LLVNAVAWNR 120
121 QQITEVSTK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [130-831] |
1 11 21 31 41 51
| | | | | |
1 EIILGTQDGQ LFEMAVDEKD KREKYIKFLF ELEELPEAFK ALQMETANIS SGMRYYVMAV 60
61 TPTRLYSFTG IGTLESVFAS YKERAVHFME LPGEIPNRQV LDYLRLILRI KEITKCNSTL 120
121 LTWTGIYHGG LNFGAQHSYP NGDENFVENK ALLDYSKLSD GTEAVKPGSM ALSEYHFLLL 180
181 IGNKVKVVNR ISEQIIEELQ FDITSDSVSR GIIGLCSDAS ANVFYAYDQN SIFQVSVIDE 240
241 GRDMWKVYLD LKVYAAALAN CRDPLQRDQV YLVQAESAFT DKEYLRAASF YAKINYVISF 300
301 EEVTLKFISI NEPEALRTFL LHKLDNLSKD DKCQITMIST WATELYLDKI NRLLLEDDTA 360
361 IENRDSEYHS VIQEFRAFMS DCKDELDEAT TVKILESYGR VEELVYFANL KEQYEIVVLH 420
421 YIQQGEAKKA LEVLQKSSVS VELQYQFAPE LIMLDAYETV ESWMANKNLN PRRLITAMMR 480
481 YSSGPHAKNE THEVIKYLEF CVHRLHNEDP GIHSLLLSLY AKQEDDGALL RFLQCKFGKG 540
541 RENGPEFFYD PKYALRLCLK ERRTRACVHI YSMMSMHEEA VALALQIDPE LAMAEADKVE 600
601 DDEDLRKKLW LMVAKHVVKQ EKGAKRENIR KAIAFLKETD GLLKIEDILP FFPDFALIDD 660
661 FKEAICSSLE DYNKQIEQLK EEMNDATRGA DNIRNDISAL TQ
|
| Detection Method: | |
| Confidence: | 80.09691 |
| Match: | 1xi4A |
| Description: | Clathrin D6 Coat |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [832-994] |
1 11 21 31 41 51
| | | | | |
1 RYAVIDRDEE CGVCKRKILM MSGDFRMAQG YSSAGPLAPF YVFPCGHSFH AQCLITHVTS 60
61 CAHEEQAEHI LDLQKQLTLL GSETRRDING NRSDEPITST TTADKLRSEL DDAIASECPF 120
121 CGELMINEIT LPFIKPEDSQ YSTSWDLRSE TNLANQRTIS LPV
|
| Detection Method: | |
| Confidence: | 1.56 |
| Match: | 1v87A |
| Description: | Solution Structure of the Ring-H2 Finger Domain of Mouse Deltex Protein 2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.13191655110108 | bayes_pls_golite062009 |
| protein binding | 1.50887080730571 | bayes_pls_golite062009 |
| hydrolase activity | 0.655294192941994 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.255545689478916 | bayes_pls_golite062009 |
| catalytic activity | 0.168711389690753 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.156675195132937 | bayes_pls_golite062009 |
