| Protein: | gi|30697566 |
| Organism: | Arabidopsis thaliana |
| Length: | 453 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30697566.
| Description | E-value | Query Range |
Subject Range |
|
|
474.0 | [0..21] | [453..1] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MLEVLQAIVL FILFWVWLSW MGGSSSKESP RGGGSGRRYE RSVSGSSSYS SAWDQSSYYQ 60
61 TPNHPSASPV SSYNSGRQTP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.371 | N/A | N/A | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.256 | N/A | N/A | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.245 | N/A | N/A | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.241 | N/A | N/A | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.234 | N/A | N/A | d.9.2 | Description not found. |
|
Region A: Residues: [81-318] |
1 11 21 31 41 51
| | | | | |
1 KNLERKYSRI ADNYRSIDEV TAALSHAGLE SSNLIVGIDV TKSNEWTGAR SFGRKSLHFI 60
61 GTTPNPYQQA ISIIGKTLSV FDEDNLIPCY GFGDATTHDQ DVFSFNPNDT YCNGFEEVLM 120
121 CYREIVPQLR LSGPTSFAPI IERAMTIVEE SGGQYHVLLI IADGQVTRSV DTDNGGFSPQ 180
181 EQQTIDAIVR ASEYPLSIVL VGVGDGPWDT MRQFDDNIPA RAFDNFQFVN FTDIMSKN
|
| Detection Method: | |
| Confidence: | 2.77 |
| Match: | 1q0pA |
| Description: | A domain of Factor B |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [319-453] |
1 11 21 31 41 51
| | | | | |
1 IDPARKEAEF ALSALMEIPS QYKATLELGL LGQRTGHCPD RIALPPPTYA TQSMRNSPRT 60
61 SRSTSFQNKP YDNGVSSTPP STTHNESQQQ FCPVCLVSAK NMAFNCGHQT CAGCGEDLHV 120
121 CPICRSSISV RIKLY
|
| Detection Method: | |
| Confidence: | 12.0 |
| Match: | 1fbvA |
| Description: | Cbl; N-terminal domain of cbl (N-cbl); CBL |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.434026084000615 | bayes_pls_golite062009 |
| protein binding | 0.31534665043077 | bayes_pls_golite062009 |
