| Protein: | gi|42573345 |
| Organism: | Arabidopsis thaliana |
| Length: | 294 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42573345.
| Description | E-value | Query Range |
Subject Range |
|
|
278.0 | [0..1] | [292..1] |
|
|
225.0 | [0..85] | [292..1] |
|
|
220.0 | [0..85] | [292..1] |
|
|
219.0 | [0..85] | [292..1] |
|
|
219.0 | [0..85] | [293..1] |
|
|
219.0 | [0..85] | [292..1] |
|
|
219.0 | [0..85] | [292..1] |
|
|
217.0 | [0..85] | [292..429] |
|
Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MKSAISSSLF FNSKNLLNPN PLSRFISLKS NFLPKLSPRS ITSHTLKLPS SSTSALRSIS 60
61 SSMASSFNPE QARVPSALPL PAP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [84-294] |
1 11 21 31 41 51
| | | | | |
1 PLTKFNIGLC QLSVTSDKKR NISHAKKAIE EAASKGAKLV LLPEIWNSPY SNDSFPVYAE 60
61 EIDAGGDASP STAMLSEVSK RLKITIIGGS IPERVGDRLY NTCCVFGSDG ELKAKHRKIH 120
121 LFDIDIPGKI TFMESKTLTA GETPTIVDTD VGRIGIGICY DIRFQELAMI YAARGAHLLC 180
181 YPGAFNMTTG PLHWELLQRA RATDNQVHEP S
|
| Detection Method: | |
| Confidence: | 51.522879 |
| Match: | 1f89A |
| Description: | hypothetical protein yl85 |
Matching Structure (courtesy of the PDB): |
|
