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Protein Overview: NILP3_ARATH

General Information:
Name(s) found: NILP3_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Omega-amidase, chloroplastic OS=Arabidopsis thaliana GN=NLP3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 369 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: nitrogen compound metabolic process [IEA][ISS]
    Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [ISS]
    zinc ion binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSAISSSLF FNSKNLLNPN PLSRFISLKS NFLPKLSPRS ITSHTLKLPS SSTSALRSIS  60
   61 SSMASSFNPE QARVPSALPL PAPPLTKFNI GLCQLSVTSD KKRNISHAKK AIEEAASKGA 120
  121 KLVLLPEIWN SPYSNDSFPV YAEEIDAGGD ASPSTAMLSE VSKRLKITII GGSIPERVGD 180
  181 RLYNTCCVFG SDGELKAKHR KIHLFDIDIP GKITFMESKT LTAGETPTIV DTDVGRIGIG 240
  241 ICYDIRFQEL AMIYAARGAH LLCYPGAFNM TTGPLHWELL QRARATDNQL YVATCSPARD 300
  301 SGAGYTAWGH STLVGPFGEV LATTEHEEAI IIAEIDYSIL EQRRTSLPLN RQRRGDLYQL 360
  361 VDVQRLDSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..369] PSI-BLAST 74.69897 hypothetical protein yl85

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.64442398754697 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.35962310800332 bayes_pls_golite062009
  • N-carbamoylputrescine amidase activity
    		•  0.749539597459006 bayes_pls_golite062009
  • hydrolase activity
    		•  0.06604196264626 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.56

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle