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View Structure Prediction Details

Protein: NILP3_ARATH
Organism: Arabidopsis thaliana
Length: 369 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NILP3_ARATH.

Description E-value Query
Range
Subject
Range
NIT2 - nitrilase family, member 2
312.0 [0..85] [364..1]

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Predicted Domain #1
Region A:
Residues: [1-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSAISSSLF FNSKNLLNPN PLSRFISLKS NFLPKLSPRS ITSHTLKLPS SSTSALRSIS  60
   61 SSMASSFNPE QARVPSALPL PAPPLTKFNI GLCQLSVTSD KKRNISHAKK AIEEAASKGA 120
  121 KLVLLPEIWN SPYSNDSFPV YAEEIDAGGD ASPSTAMLSE VSKRLKITII GGSIPERVGD 180
  181 RLYNTCCVFG SDGELKAKHR KIHLFDIDIP GKITFMESKT LTAGETPTIV DTDVGRIGIG 240
  241 ICYDIRFQEL AMIYAARGAH LLCYPGAFNM TTGPLHWELL QRARATDNQL YVATCSPARD 300
  301 SGAGYTAWGH STLVGPFGEV LATTEHEEAI IIAEIDYSIL EQRRTSLPLN RQRRGDLYQL 360
  361 VDVQRLDSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.69897
Match: 1f89A
Description: hypothetical protein yl85
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.64442398754697 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.35962310800332 bayes_pls_golite062009
N-carbamoylputrescine amidase activity 0.749539597459006 bayes_pls_golite062009
hydrolase activity 0.06604196264626 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle