| Protein: | gi|42568485 |
| Organism: | Arabidopsis thaliana |
| Length: | 695 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42568485.
| Description | E-value | Query Range |
Subject Range |
|
|
652.0 | [0..1] | [695..1] |
|
|
647.0 | [0..7] | [690..1] |
|
|
647.0 | [0..7] | [690..1] |
|
Region A: Residues: [1-69] |
1 11 21 31 41 51
| | | | | |
1 MGVAQAMEAL TERASLMKES LHKSQTITDN MVGILGSFDH RLSALETAMR PTQSLKVVEF 60
61 EIYLLLKLK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.922 | N/A | N/A | a.8.11 | Description not found. |
|
Region A: Residues: [70-143] |
1 11 21 31 41 51
| | | | | |
1 CDSGFGDKMI RTHSIRRAHE NIDKALKAAE VILDQFDISR KLSVLKMITV DMFSLVEVTT 60
61 ETFVENASCE QSSK
|
| Detection Method: | |
| Confidence: | 1.15 |
| Match: | 2b7mA |
| Description: | Crystal Structure of the S. cerevisiae Exocyst Component Exo70p |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [144-695] |
1 11 21 31 41 51
| | | | | |
1 CLLSDAAEAK ILRGPHEDLE SYLEAIDQLR GTIKFFSNNK MFKSASGVIS HAHGLLSKAL 60
61 SKLEDEFRQI LQNYSKPMEP DRLFECLPSN LRPSSEGEGG GGKTHDPHHK SLENAIFTVP 120
121 TVIPPRVLPL LHDLAQQMVQ AGHQQQLFKS YRDTRAAVLE QSLRKLGVER LSKDDVQRMQ 180
181 WEVLEAKIGN WIHYMRISVK LLFAAEKKIC DQILDGVESL RDQCFGEVTV NSVAVLLSFG 240
241 EAIAKSKRSP EKLFVLLDMY EIMRELQPEI ELLFGSKPCA EMKESALNLT KRLAQTAQET 300
301 FADFEEAVEK DATKTAVMDG TVHPLTSYVI NYVKFLFDYQ TTLRLLFQEF DSKDPDSELG 360
361 AVTTRIMHAL QNNLDGKSKQ YKDVALTQLF LMNNVHYIVR SVRRSEAKDL LGDDWVQIHR 420
421 RIVQQHANQY KRVSWAKILQ CLTVQSSGSG PIENSNISRA SVKDRFKTFN SQFEELHQRQ 480
481 CQWTVPDSEL RESLRLAVAE VLLPAFRSFL KRFGPMIESG KNPQKYIRFS PEDLERMLNE 540
541 FFEGKTWSEP KR
|
| Detection Method: | |
| Confidence: | 113.0 |
| Match: | 2pftA |
| Description: | No description for 2pftA was found. |
