YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|42568485

General Information:
Name(s) found: gi|42568485 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|42568485|ref|NP_200047.2| protein binding [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 695 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVAQAMEAL TERASLMKES LHKSQTITDN MVGILGSFDH RLSALETAMR PTQSLKVVEF  60
   61 EIYLLLKLKC DSGFGDKMIR THSIRRAHEN IDKALKAAEV ILDQFDISRK LSVLKMITVD 120
  121 MFSLVEVTTE TFVENASCEQ SSKCLLSDAA EAKILRGPHE DLESYLEAID QLRGTIKFFS 180
  181 NNKMFKSASG VISHAHGLLS KALSKLEDEF RQILQNYSKP MEPDRLFECL PSNLRPSSEG 240
  241 EGGGGKTHDP HHKSLENAIF TVPTVIPPRV LPLLHDLAQQ MVQAGHQQQL FKSYRDTRAA 300
  301 VLEQSLRKLG VERLSKDDVQ RMQWEVLEAK IGNWIHYMRI SVKLLFAAEK KICDQILDGV 360
  361 ESLRDQCFGE VTVNSVAVLL SFGEAIAKSK RSPEKLFVLL DMYEIMRELQ PEIELLFGSK 420
  421 PCAEMKESAL NLTKRLAQTA QETFADFEEA VEKDATKTAV MDGTVHPLTS YVINYVKFLF 480
  481 DYQTTLRLLF QEFDSKDPDS ELGAVTTRIM HALQNNLDGK SKQYKDVALT QLFLMNNVHY 540
  541 IVRSVRRSEA KDLLGDDWVQ IHRRIVQQHA NQYKRVSWAK ILQCLTVQSS GSGPIENSNI 600
  601 SRASVKDRFK TFNSQFEELH QRQCQWTVPD SELRESLRLA VAEVLLPAFR SFLKRFGPMI 660
  661 ESGKNPQKYI RFSPEDLERM LNEFFEGKTW SEPKR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..69] MSA 1.038995 View MSA. Confident ab initio structure predictions are available.
    2 View Details [70..143] FFAS03 1.15 Crystal Structure of the S. cerevisiae Exocyst Component Exo70p
    3 View Details [144..695] PSI-BLAST 113.0 No description for 2pftA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle