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Protein Overview: gi|218195860

General Information:
Name(s) found: gi|218195860 [NCBI NR]
Description(s) found:
  • gi|218195860|gb|EEC78287.1| hypothetical protein OsI_17996 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 634 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METLAQRAAL LRESLQKSQS VTDAVVSILG SFDSRLSALD AAMRPIQVRT HAVRTAHENI  60
   61 DRTLRSADVI LTQFDRTREA EREIQKGPHE NLQGFLDAVD RLRSIERFFS SNRSYRSSDG 120
  121 VLNHVNALLS KALVKMEDEF QKQLTQRSKP IEPDRLFDCL PSTLRPSSES HPEGGKNQSH 180
  181 SENQQNSEAA VYSPPALIEP RFIPFLAKLA QQLVQAGCQQ QCSEIYSEAR ASALESSLKS 240
  241 LGVEKLSKDE VQKMPWEILE SKIGNWIHFM RIAVKLLFAA ERQLCDQVFE CSQSLRDKCF 300
  301 AQITRNSLAT LLSFGEAIAM SKRSPEKLFV LLDMYEIMCE LQADIDTIFV GESCSQMRES 360
  361 ALSLTKCLAQ TAQKTFSDFE EAVEKDATKN IHIDGTVHPL TSYVINYVKF LFDYQSTLKQ 420
  421 LFQEFKGEDG TGSELATVTM SIMQALQNNL DAKAKQYKDP ALMHIFLMNN IHYIVKSVRR 480
  481 SEAKDLLGDD WIQRHRRIVQ QNANHYRRIA WSKVLQCLSG QGLTSSGGSG QVGSEGGNSS 540
  541 GASRAAVKER FRSFNVLFEE IYQKQCGWSV PDTELRESLR LAVAEILLPA YRSFLKRFGP 600
  601 LIENSKAPGK YVKHTPEQVE LLLANLFEGK QERT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..52] MSA 2.059996 View MSA. No confident structure predictions are available.
    2 View Details [53..634] PSI-BLAST 124.0 No description for 2pftA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle