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View Structure Prediction Details

Protein: gi|218195860
Organism: Oryza sativa Indica Group
Length: 634 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218195860.

Description E-value Query
Range
Subject
Range
gi|222615549, gi... - gi|222615549|gb|EEE51681.1| hypothetical protein OsJ_33035 [Oryza sativa Japonica Group], gi|2156947...
gi|218185284 - gi|218185284|gb|EEC67711.1| hypothetical protein OsI_35189 [Oryza sativa Indica Group]
687.0 [0..2] [631..13]

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Predicted Domain #1
Region A:
Residues: [1-52]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METLAQRAAL LRESLQKSQS VTDAVVSILG SFDSRLSALD AAMRPIQVRT HA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [53-634]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VRTAHENIDR TLRSADVILT QFDRTREAER EIQKGPHENL QGFLDAVDRL RSIERFFSSN  60
   61 RSYRSSDGVL NHVNALLSKA LVKMEDEFQK QLTQRSKPIE PDRLFDCLPS TLRPSSESHP 120
  121 EGGKNQSHSE NQQNSEAAVY SPPALIEPRF IPFLAKLAQQ LVQAGCQQQC SEIYSEARAS 180
  181 ALESSLKSLG VEKLSKDEVQ KMPWEILESK IGNWIHFMRI AVKLLFAAER QLCDQVFECS 240
  241 QSLRDKCFAQ ITRNSLATLL SFGEAIAMSK RSPEKLFVLL DMYEIMCELQ ADIDTIFVGE 300
  301 SCSQMRESAL SLTKCLAQTA QKTFSDFEEA VEKDATKNIH IDGTVHPLTS YVINYVKFLF 360
  361 DYQSTLKQLF QEFKGEDGTG SELATVTMSI MQALQNNLDA KAKQYKDPAL MHIFLMNNIH 420
  421 YIVKSVRRSE AKDLLGDDWI QRHRRIVQQN ANHYRRIAWS KVLQCLSGQG LTSSGGSGQV 480
  481 GSEGGNSSGA SRAAVKERFR SFNVLFEEIY QKQCGWSVPD TELRESLRLA VAEILLPAYR 540
  541 SFLKRFGPLI ENSKAPGKYV KHTPEQVELL LANLFEGKQE RT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 124.0
Match: 2pftA
Description: No description for 2pftA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle