| Protein: | gi|18413928 |
| Organism: | Arabidopsis thaliana |
| Length: | 316 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18413928.
| Description | E-value | Query Range |
Subject Range |
|
|
364.0 | [0..5] | [316..54] |
|
|
234.0 | [0..11] | [311..136] |
|
|
233.0 | [0..46] | [299..62] |
|
|
226.0 | [0..41] | [310..61] |
|
|
226.0 | [0..46] | [311..67] |
|
|
224.0 | [0..46] | [311..53] |
|
|
224.0 | [0..46] | [311..53] |
|
Region A: Residues: [1-114] |
1 11 21 31 41 51
| | | | | |
1 MDHQHSSDSP MHESTTSSSS SSWSFGNLIK TLSTKSESVI GSYRRDLVEF GSELKKETSI 60
61 IRRVASRLPD SLEIGASVAS ESLESVGQVI DDIGATVWKS TAKIISRGKE SLEP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [115-234] |
1 11 21 31 41 51
| | | | | |
1 NRDRTNQVLS LKPYRRFEMM LLALQSDKGT FVREPDDLSD FENWSLGLKL EEKRNEIVEL 60
61 INGNKGVKEI YEEIVPVEVD AETFWRRYYY KVYKLEQVEE ARVKLVKRAI SGEEDEDLSW 120
121
|
| Detection Method: | |
| Confidence: | 28.522879 |
| Match: | 1x3aA |
| Description: | Solution structure of the BSD domain of human Synapse associated protein 1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [235-316] |
1 11 21 31 41 51
| | | | | |
1 DLDDEKEKVE SRDVSSKDSD YSVISTQPSL LGSEDLGWDK MEEDIRSNEE RLDWRRRAGV 60
61 AVEEEEDLSW DIEDEDDDSV QQ
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.313 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.313 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.272 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.245 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.230 | N/A | N/A | d.169.1 | C-type lectin-like |
| View | Download | 0.220 | N/A | N/A | b.36.1 | PDZ domain-like |
| View | Download | 0.215 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.215 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.207 | N/A | N/A | a.38.1 | Helix-loop-helix DNA-binding domain |
