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Protein Overview: gi|18413928

General Information:
Name(s) found: gi|18413928 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|18413928|ref|NP_567396.1| BSD domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 316 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHQHSSDSP MHESTTSSSS SSWSFGNLIK TLSTKSESVI GSYRRDLVEF GSELKKETSI  60
   61 IRRVASRLPD SLEIGASVAS ESLESVGQVI DDIGATVWKS TAKIISRGKE SLEPNRDRTN 120
  121 QVLSLKPYRR FEMMLLALQS DKGTFVREPD DLSDFENWSL GLKLEEKRNE IVELINGNKG 180
  181 VKEIYEEIVP VEVDAETFWR RYYYKVYKLE QVEEARVKLV KRAISGEEDE DLSWDLDDEK 240
  241 EKVESRDVSS KDSDYSVIST QPSLLGSEDL GWDKMEEDIR SNEERLDWRR RAGVAVEEEE 300
  301 DLSWDIEDED DDSVQQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] MSA 1.050994 View MSA. No confident structure predictions are available.
    2 View Details [115..234] PSI-BLAST 28.522879 Solution structure of the BSD domain of human Synapse associated protein 1
    3 View Details [235..316] MSA 1.036996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle