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Protein Overview: gi|56783794, gi|...

General Information:
Name(s) found: gi|56783794 [NCBI NR]
gi|115435912 [NCBI NR]
gi|113532245 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|56783794|dbj|BAD81206.1| hypothetical protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115435912|ref|NP_001042714.1| Os01g0273300 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113532245|dbj|BAF04628.1| Os01g0273300 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 537 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFFSSVLSA AGVGGDEHEE ERGEGEEAAA EQGEEGEAES GGGWSFGGLI KTLAEEIDVR  60
   61 PRDEQEAEEG GEEVAEGKGE VEEEADAGGG WIFGGLIKTL AEEIEEQRKV NSQLEAEEEA 120
  121 AAAAAAAAAA AAEEEGGETA GSGDGGEWSF GGLIQTFATR SESVLEGYRR DIQDLGSGLR 180
  181 LETATLRAAA ARAAAAFPGA LEAGASAASN RLESVGQAVD DLGAAAAVLL SHANEALRSV 240
  241 DADGEDGAGD GSSHPSDSAS ASGASWRASL PSKKYTRFEA QVLALRADPA TFTEEPEDAD 300
  301 GFAKWRDAFR IDERKEEIEG VLKESPGLES FVERLVPSVV DYDMFWCRYF FAVDKLRQAE 360
  361 DVRTKLVTRA MSKEDEEELS WDVDDDDEDD DNGDHKEGAN TVVNKKEEQI EEPVSHKTED 420
  421 DKQGADTPDV SEDKKTTLAA EKDGNGESKD EVAAPKSSND MGREEKIDSS KESEFSAASP 480
  481 PSAQEEDLSW EEIEDVGDED EKKKPIPRSS PPSKAEDIRK RFSSVEDDEE LSWDIDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] deduced N/A No confident structure predictions are available.
    2 View Details [141..265] deduced N/A No confident structure predictions are available.
    3 View Details [266..378] PSI-BLAST 18.0 Solution structure of the BSD domain of human Synapse associated protein 1
    4 View Details [379..537] FFAS03 1.09 No description for 2j63A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.50

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle