| Protein: | DSE1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 386 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DSE1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
413.0 | [0..1] | [385..1198] |
|
Region A: Residues: [1-386] |
1 11 21 31 41 51
| | | | | |
1 MSKRPPPDPV AVLRGHRHSV MDVSFHPSKS LLFTGSADGE LRIWDTIQHR AVSSAWAHSR 60
61 ANGVLAVAAS PWLGEDKIIS QGRDGTVKCW DIEDGGLSRD PLLILETCAY HFCKFSLVKK 120
121 PKNSLQEAES HSRGCDEQDG GDTCNVQIAD DSERSEEDSG LLQDKDHAEG TTFVAVVGEQ 180
181 PTEVEIWDLN TGDKIIQLPQ SSPDESPNAS TKGRGMCMAV QLFCPPESQG FLHVLAGYED 240
241 GSILLWDIRN AKIPLTSVKF HSEPVLSLSV ASSCDGGISG GADDKIVMYN LNHSTGSCTI 300
301 RKEITLERPG VSGTSIRVDG KIAATAGWDH RIRVYNYRKG NALAILKYHR ATCNAVSYSP 360
361 DCELMASASE DATVALWKLY PPHKSL
|
| Detection Method: |  |
| Confidence: | 74.0 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| protein binding | 1.21879977456466 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.19593750149343 | bayes_pls_golite062009 |
| receptor activity | 1.12819778129653 | bayes_pls_golite062009 |
| signal transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| molecular transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| histone binding | 0.685319917508843 | bayes_pls_golite062009 |
| transcription regulator activity | 0.579815310385678 | bayes_pls_golite062009 |
| nucleic acid binding | 0.570141050045461 | bayes_pls_golite062009 |
| actin binding | 0.529861581509437 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.485054404024611 | bayes_pls_golite062009 |
| receptor binding | 0.316169754698691 | bayes_pls_golite062009 |
| chromatin binding | 0.145491963066342 | bayes_pls_golite062009 |
| DNA binding | 0.0736878329528894 | bayes_pls_golite062009 |
