| Protein: | RP41L_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 256 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RP41L_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
264.0 | [0..8] | [255..299] |
|
Region A: Residues: [1-256] |
1 11 21 31 41 51
| | | | | |
1 MAAKPGAATP TYSPKIVGRS RLPIFKDSDL DWSRPDGRGF HQCRPALLQT GAVSSASGSA 60
61 YAEFGNTKVI VSVFGPRESK KAMVYSDVGR LNCNVSYTNF ASPTLGQGTD HKEYSSMLHK 120
121 ALEGVIMMET FPKTTVDVFA LVLESGGSDL SVLISCASLA LADAGIMMYD LITAVSVSCI 180
181 GKSLMIDPVT EEEGCEDGSF MMTCMPSRYE ITQLTITGEW TTPNINEAMQ LCLDASSKLG 240
241 EIMRDCLKQS ASASDE
|
| Detection Method: |  |
| Confidence: | 62.045757 |
| Match: | 2br2B |
| Description: | RNase PH core of the archaeal exosome |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| exoribonuclease activity | 7.55877202113513 | bayes_pls_golite062009 |
| ribonuclease activity | 7.54644729272203 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 7.5310318714913 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 6.46930372693262 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 4.29895100594643 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 3.83939403332553 | bayes_pls_golite062009 |
| exonuclease activity | 3.40686901061667 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 2.86434572018929 | bayes_pls_golite062009 |
| RNA binding | 2.05527376734941 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.90115575554186 | bayes_pls_golite062009 |
| structural molecule activity | 1.69321127364043 | bayes_pls_golite062009 |
| hydrolase activity | 1.55476709794855 | bayes_pls_golite062009 |
| transcription regulator activity | 1.20748032530392 | bayes_pls_golite062009 |
| mRNA binding | 1.17402119891853 | bayes_pls_golite062009 |
| nucleic acid binding | 1.05662964529454 | bayes_pls_golite062009 |
| binding | 0.907487229190259 | bayes_pls_golite062009 |
| catalytic activity | 0.878454819018611 | bayes_pls_golite062009 |
| DNA binding | 0.828609700556836 | bayes_pls_golite062009 |
| nuclease activity | 0.69721312877891 | bayes_pls_golite062009 |
| carbohydrate kinase activity | 0.51810239718467 | bayes_pls_golite062009 |
| tRNA-specific ribonuclease activity | 0.383567539949931 | bayes_pls_golite062009 |
| ATP-dependent peptidase activity | 0.1173709890655 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.0287026367466632 | bayes_pls_golite062009 |
