| Protein: | gi|42572841 |
| Organism: | Arabidopsis thaliana |
| Length: | 545 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42572841.
| Description | E-value | Query Range |
Subject Range |
|
|
328.0 | [0..1] | [544..1] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 METSSTISIG SCLKEHQKIY KEWFNIADSD GDGRVSGNDA TKFFAMSKLS RQELKQVWAV 60
61 ADSKRQGFLG LSEFITAMKL VSLAQEGHEI TSDLLKGSID MKSVELPVLE GLENVVSKQK 120
121 VSKTNVDVED NVTK
|
| Detection Method: |  |
| Confidence: | 16.0 |
| Match: | 1y6wA |
| Description: | Trapped intermediate of calmodulin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| calcium ion binding | 2.10993417016231 | bayes_pls_golite062009 |
| binding | 1.38572474078647 | bayes_pls_golite062009 |
| cation binding | 1.32146266431825 | bayes_pls_golite062009 |
| metal ion binding | 1.32146266431825 | bayes_pls_golite062009 |
| ion binding | 1.31242124126239 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.539550637107889 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.49944935937406 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.486374653947972 | bayes_pls_golite062009 |
| protein binding | 0.124994709840647 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 0.0724768101463518 | bayes_pls_golite062009 |
|
Region A: Residues: [135-545] |
1 11 21 31 41 51
| | | | | |
1 PQVTAKTPWF KSKSIIKPQV NVVTIVDGLK RLYTEKLKPL EVTYRFNDFA SPVLTSSDFD 60
61 AKPMVMLLGQ YSTGKTTFIK HLLGCDYPGA HIGPEPTTDR FVVAMSGPDE RTIPGNTMAV 120
121 QADMPFNGLT SFGGAFLSKF ECSQMPHPVL DQITLVDTPG VLSGEKQRMQ RSYDFTGVIS 180
181 WFASKCDMIL LLFDPHKLDI SDEFKRVITS LRGNEDKIRV VLNKADQVDT QQLMRVYGAL 240
241 MWSLGKVLNT PEVVRVYIGS FNDKPINEVA VGPIGKELFE KEQNDLLADL MDVPKKACDR 300
301 KINEFVKRAR SAKINAYIMS HLKKEMPAMM GKSKAQQRLM DNLEEEFGKV QREFHLPAGD 360
361 FPSVEHFREV LGGYNIDKFE KLKPKMIQAV DDMLGYDIPD LLKKFRNPYD N
|
| Detection Method: | |
| Confidence: | 72.0 |
| Match: | 2qptA |
| Description: | No description for 2qptA was found. |
