| Protein: | GSO1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1249 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GSO1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
881.0 | [0..1] | [1249..1] |
|
Region A: Residues: [1-116] |
1 11 21 31 41 51
| | | | | |
1 MQPLVLLLLF ILCFSGLGQP GIINNDLQTL LEVKKSLVTN PQEDDPLRQW NSDNINYCSW 60
61 TGVTCDNTGL FRVIALNLTG LGLTGSISPW FGRFDNLIHL DLSSNNLVGP IPTALS
|
| Detection Method: |  |
| Confidence: | 53.69897 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [117-503] |
1 11 21 31 41 51
| | | | | |
1 NLTSLESLFL FSNQLTGEIP SQLGSLVNIR SLRIGDNELV GDIPETLGNL VNLQMLALAS 60
61 CRLTGPIPSQ LGRLVRVQSL ILQDNYLEGP IPAELGNCSD LTVFTAAENM LNGTIPAELG 120
121 RLENLEILNL ANNSLTGEIP SQLGEMSQLQ YLSLMANQLQ GLIPKSLADL GNLQTLDLSA 180
181 NNLTGEIPEE FWNMSQLLDL VLANNHLSGS LPKSICSNNT NLEQLVLSGT QLSGEIPVEL 240
241 SKCQSLKQLD LSNNSLAGSI PEALFELVEL TDLYLHNNTL EGTLSPSISN LTNLQWLVLY 300
301 HNNLEGKLPK EISALRKLEV LFLYENRFSG EIPQEIGNCT SLKMIDMFGN HFEGEIPPSI 360
361 GRLKELNLLH LRQNELVGGL PASLGNC
|
| Detection Method: | |
| Confidence: | 47.69897 |
| Match: | 2omuA |
| Description: | No description for 2omuA was found. |
| Term | Confidence | Notes |
| receptor activity | 3.26307298864411 | bayes_pls_golite062009 |
| transmembrane receptor activity | 3.15814977487775 | bayes_pls_golite062009 |
| molecular transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| signal transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 2.38174370875276 | bayes_pls_golite062009 |
| binding | 1.87302803330255 | bayes_pls_golite062009 |
| receptor binding | 1.66628371061052 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 1.50579173120225 | bayes_pls_golite062009 |
| protein kinase activity | 1.43632437878638 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 1.36671598599873 | bayes_pls_golite062009 |
| collagen binding | 1.31548082127061 | bayes_pls_golite062009 |
| nucleic acid binding | 1.31434688144553 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.28988458709664 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.16530645523007 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.12585418084562 | bayes_pls_golite062009 |
| kinase activity | 1.11577341189523 | bayes_pls_golite062009 |
| extracellular matrix binding | 0.907118880836251 | bayes_pls_golite062009 |
| insulin-like growth factor binding | 0.72018950361604 | bayes_pls_golite062009 |
| protein binding | 0.646159692466759 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 0.430075899423884 | bayes_pls_golite062009 |
| protein-hormone receptor activity | 0.42902267001067 | bayes_pls_golite062009 |
| polysaccharide binding | 0.34063289254939 | bayes_pls_golite062009 |
| pattern binding | 0.339536765321749 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 0.231213253402712 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.154501444195573 | bayes_pls_golite062009 |
| growth factor binding | 0.0358215683345522 | bayes_pls_golite062009 |
|
Region A: Residues: [504-588] |
1 11 21 31 41 51
| | | | | |
1 HQLNILDLAD NQLSGSIPSS FGFLKGLEQL MLYNNSLQGN LPDSLISLRN LTRINLSHNR 60
61 LNGTIHPLCG SSSYLSFDVT NNGFE
|
| Detection Method: | |
| Confidence: | 38.69897 |
| Match: | 2id5A |
| Description: | No description for 2id5A was found. |
|
Region A: Residues: [589-935] |
1 11 21 31 41 51
| | | | | |
1 DEIPLELGNS QNLDRLRLGK NQLTGKIPWT LGKIRELSLL DMSSNALTGT IPLQLVLCKK 60
61 LTHIDLNNNF LSGPIPPWLG KLSQLGELKL SSNQFVESLP TELFNCTKLL VLSLDGNSLN 120
121 GSIPQEIGNL GALNVLNLDK NQFSGSLPQA MGKLSKLYEL RLSRNSLTGE IPVEIGQLQD 180
181 LQSALDLSYN NFTGDIPSTI GTLSKLETLD LSHNQLTGEV PGSVGDMKSL GYLNVSFNNL 240
241 GGKLKKQFSR WPADSFLGNT GLCGSPLSRC NRVRSNNKQQ GLSARSVVII SAISALTAIG 300
301 LMILVIALFF KQRHDFFKKV GHGSTAYTSS SSSSQATHKP LFRNGAS
|
| Detection Method: | |
| Confidence: | 6.48 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor activity | 3.06241055332206 | bayes_pls_golite062009 |
| transmembrane receptor activity | 2.96127377071509 | bayes_pls_golite062009 |
| molecular transducer activity | 2.4085292238246 | bayes_pls_golite062009 |
| signal transducer activity | 2.4085292238246 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 2.1498251178942 | bayes_pls_golite062009 |
| binding | 1.88645638630371 | bayes_pls_golite062009 |
| receptor binding | 1.62537779185792 | bayes_pls_golite062009 |
| protein kinase activity | 1.44543786404772 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 1.39264933048518 | bayes_pls_golite062009 |
| nucleic acid binding | 1.33922283636437 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 1.27280680991092 | bayes_pls_golite062009 |
| collagen binding | 1.2024797718455 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.18001333603647 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.14774707593524 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.13369503797591 | bayes_pls_golite062009 |
| kinase activity | 1.13356668527648 | bayes_pls_golite062009 |
| extracellular matrix binding | 0.696793963784508 | bayes_pls_golite062009 |
| protein binding | 0.629660151009639 | bayes_pls_golite062009 |
| insulin-like growth factor binding | 0.588503814637679 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 0.364875472627902 | bayes_pls_golite062009 |
| pattern binding | 0.218511437528696 | bayes_pls_golite062009 |
| polysaccharide binding | 0.201838575206714 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 0.176363297428464 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.143284785584541 | bayes_pls_golite062009 |
| protein-hormone receptor activity | 0.0124918555036033 | bayes_pls_golite062009 |
|
Region A: Residues: [936-1249] |
1 11 21 31 41 51
| | | | | |
1 KSDIRWEDIM EATHNLSEEF MIGSGGSGKV YKAELENGET VAVKKILWKD DLMSNKSFSR 60
61 EVKTLGRIRH RHLVKLMGYC SSKSEGLNLL IYEYMKNGSI WDWLHEDKPV LEKKKKLLDW 120
121 EARLRIAVGL AQGVEYLHHD CVPPIVHRDI KSSNVLLDSN MEAHLGDFGL AKVLTENCDT 180
181 NTDSNTWFAC SYGYIAPEYA YSLKATEKSD VYSMGIVLME IVTGKMPTDS VFGAEMDMVR 240
241 WVETHLEVAG SARDKLIDPK LKPLLPFEED AACQVLEIAL QCTKTSPQER PSSRQACDSL 300
301 LHVYNNRTAG YKKL
|
| Detection Method: | |
| Confidence: | 66.0 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
