| Protein: | gi|30684169 |
| Organism: | Arabidopsis thaliana |
| Length: | 505 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30684169.
| Description | E-value | Query Range |
Subject Range |
|
|
418.0 | [0..1] | [505..1] |
|
Region A: Residues: [1-406] |
1 11 21 31 41 51
| | | | | |
1 MEVLASSSLS PISFTKPNKI NPNFSIQISK ASKFSYARSR SNISRSNAAN PGVVFVCNRF 60
61 LCVIERNDQR KLSGKVMMKS SVNFRQNLSV ALVRIVSVLL VSSISVVTTD SPPSWGLTEE 120
121 NLLFLEAWRT IDRAYIDKTF NGQSWFRYRE TALRNEPMNT REETYMAIKK MVATLDDPFT 180
181 RFLEPGKFKS LRSGTQGAVT GVGLSIGYPT ASDGPPAGLV VISAAPGGPA NRAGILPGDV 240
241 IQGIDNTTTE TLTIYDAAQM LQGPEGSAVE LAIRSGPETR LLTLTRERVS VNPVKSRLCE 300
301 LPGSGSNSPK IGYIKLTTFN QNASSAVREA IETLRGNNVN AFVLDLRDNS GGSFPEGIEI 360
361 AKFWLDKGVI VYICDSRGVR DIYDTDGSNA IATSEPLAVL VNKGTA
|
| Detection Method: |  |
| Confidence: | 10.39794 |
| Match: | 1ky9A |
| Description: | Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| endopeptidase activity | 1.3480254932755 | bayes_pls_golite062009 |
| binding | 1.2660260398866 | bayes_pls_golite062009 |
| protein binding | 1.24671577203404 | bayes_pls_golite062009 |
| serine hydrolase activity | 0.142618209801049 | bayes_pls_golite062009 |
| serine-type peptidase activity | 0.133450718356085 | bayes_pls_golite062009 |
|
Region A: Residues: [407-505] |
1 11 21 31 41 51
| | | | | |
1 SASEILAGAL KDNKRALVYG EPTYGKGKIQ SVFELSDGSG LAVTVARYET PAHTDIDKVG 60
61 VTPDHPLPKS FPKDEEAFCG CLKDPTAACY LNQGLLFSR
|
| Detection Method: | |
| Confidence: | 73.0 |
| Match: | 1fc6A |
| Description: | Photosystem II D1 C-terminal processing protease |
Matching Structure (courtesy of the PDB): |
|
