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View Structure Prediction Details

Protein: gi|30693691
Organism: Arabidopsis thaliana
Length: 230 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30693691.

Description E-value Query
Range
Subject
Range
ATCA1_ARATH - Alpha carbonic anhydrase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=2
262.0 [0..1] [228..1]

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Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIMMMIKLC FFSMSLICIA PADAQTEGVV FGYKGKNGPN QWGHLNPHFT TCAVGKLQSP  60
   61 IDIQRRQIFY NHKLNSIHRE YYFTNATLVN HVCNVAMFFG EGAGDVIIEN KNYTLLQMHW 120
  121 HTPSEHHLHG VQYAAELHMV HQAKDGSFAV VASLFKIGTE EPFLSQMKEK LVKLKEERLK 180
  181 GNHTAQVEVG RIDTRHIERK TRKYYRYIGS LTTPPCSENV SWTILGKVIF 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.69897
Match: 1g3zA
Description: Carbonic anhydrase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
carbonate dehydratase activity 2.35405414226159 bayes_pls_golite062009
binding 1.59667704693142 bayes_pls_golite062009
protein binding 1.30419076438266 bayes_pls_golite062009
catalytic activity 0.97285738666961 bayes_pls_golite062009
transition metal ion binding 0.36067052386032 bayes_pls_golite062009
carbon-oxygen lyase activity 0.0641135521348118 bayes_pls_golite062009
hydro-lyase activity 0.0479238316186823 bayes_pls_golite062009
lyase activity 0.0337150119314038 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle