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View Structure Prediction Details

Protein: gi|42572511
Organism: Arabidopsis thaliana
Length: 156 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42572511.

Description E-value Query
Range
Subject
Range
FOLB3_ARATH - Probable dihydroneopterin aldolase 3 OS=Arabidopsis thaliana GN=FOLB3 PE=2 SV=1
194.0 [0..1] [156..1]

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Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSSLKTMAP AKLERLCVLS FFLFCATESL ESLPEDKLIL RGLKFYGFHG VLPEERELGG  60
   61 LFIVDINLWL SLKKAIESDN LADTVSFADT FRLVKKIVEG PPRNLYETVA DDIASEMLET 120
  121 FPKINVIRVK FGKPNPSLVN STVDFLGAEL FRKRNH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.154902
Match: 1sqlA
Description: Crystal structure of 7,8-dihydroneopterin aldolase in complex with guanine
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
GTP cyclohydrolase I activity 4.32142445441644 bayes_pls_golite062009
cyclohydrolase activity 4.12134839958676 bayes_pls_golite062009
GTP cyclohydrolase activity 3.76376266092452 bayes_pls_golite062009
catalytic activity 2.57832156213163 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 2.13367928146634 bayes_pls_golite062009
dihydroneopterin aldolase activity 2.05627605013559 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.46072575729571 bayes_pls_golite062009
6-pyruvoyltetrahydropterin synthase activity 0.11818000438771 bayes_pls_golite062009
lyase activity 0.0597333135477298 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle