| Protein: | gi|30683868, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 918 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30683868, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
742.0 | [0..1] | [918..1] |
|
|
693.0 | [0..1] | [896..1] |
|
|
691.0 | [0..1] | [896..1] |
|
|
687.0 | [0..1] | [896..1] |
|
|
687.0 | [0..1] | [896..1] |
|
|
686.0 | [0..1] | [896..1] |
|
|
685.0 | [0..2] | [896..130] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MPLRLDIKRK FAQRSERVKS VDLHPTEPWI LASLYSGTVC IWNYQTQTIT KSFEVTELPV 60
61 RSAKFIPRKQ WVVAGADDMY IRVYNYNTMD KVKVFE
|
| Detection Method: |  |
| Confidence: | 83.69897 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [97-628] |
1 11 21 31 41 51
| | | | | |
1 AHSDYIRCVA VHPTLPYVLS SSDDMLIKLW DWENGWACTQ IFEGHSHYVM QVVFNPKDTN 60
61 TFASASLDRT IKIWNLGSPD PNFTLDAHQK GVNCVDYFTG GDKPYLITGS DDHTAKVWDY 120
121 QTKSCVQTLD GHTHNVSAVC FHPELPIIIT GSEDGTVRIW HATTYRLENT LNYGLERVWA 180
181 IGYIKSSRRV VIGYDEGTIM VKLGREIPVA SMDSSGKIIW AKHNEIQTAN IKSIGAGYEA 240
241 TDGERLPLSV KELGTCDLYP QSLKHNPNGR FVVVCGDGEY IIYTALAWRN RSFGSGLEFV 300
301 WSSEGECAVR ESSSKIKIFS KNFQERKSIR PTFSAEKIFG GTLLAMCSND FICFYDWAEC 360
361 RLIQQIDVTV KNLYWAESGD LVAIASDTSF YILKYNRELV SSHFDSGRPT DEEGVEDAFE 420
421 VLHENDERVR TGIWVGDCFI YNNSSWKLNY CVGGEVTTMY HLDRPMYLLG YIANQSRVYL 480
481 VDKEFNVIGY TLLLSLIEYK TLVMRGDLDR ANQILPTIPK EQHNNVAHFL ES
|
| Detection Method: | |
| Confidence: | 58.154902 |
| Match: | 1nr0A |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [629-823] |
1 11 21 31 41 51
| | | | | |
1 RGMIEDALEI ATDPDYKFDL AIQLGRLEIA KEIAEEVQSE SKWKQLGELA MSSGKLQLAE 60
61 DCMKYAMDLS GLLLLYSSLG DAEGVSKLAC LAKEQGKNNV AFLCLFTLGR LEDCLQLLVE 120
121 SNRIPEAALM ARSYLPSKVS EIVALWREDL SKVNPKAAES LADPEEYSNL FEDWQVALSV 180
181 EANTAETRGV YTAAE
|
| Detection Method: | |
| Confidence: | 1.42 |
| Match: | 1b89A |
| Description: | Clathrin heavy chain proximal leg segment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [824-918] |
1 11 21 31 41 51
| | | | | |
1 NYPSHADKPS ITLVEAFRNL QVEAEESLEN GNIDHEVAEE NGHVENEGDE EEQQEEEVNE 60
61 EEGVVDADST DGAVLVNGSE GEEEWGTNNK GNPSA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.482 | b.55.1 | PH domain-like |
| View | Download | 0.482 | b.55.1 | PH domain-like |
| View | Download | 0.273 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.244 | d.81.4 | Description not found. |
| View | Download | 0.236 | d.9.1 | Interleukin 8-like chemokines |
