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Protein Overview: gi|30683868, gi|...

General Information:
Name(s) found: gi|30683868 [NCBI NR]
gi|30683865 [NCBI NR]
gi|222422950 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|30683868|ref|NP_850593.1| coatomer protein complex, subunit beta 2 (beta prime), putative [Arabidopsis thaliana] [NCBI NR]
  • gi|30683865|ref|NP_188219.2| coatomer protein complex, subunit beta 2 (beta prime), putative [Arabidopsis thaliana] [NCBI NR]
  • gi|222422950|dbj|BAH19460.1| AT3G15980 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 918 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLRLDIKRK FAQRSERVKS VDLHPTEPWI LASLYSGTVC IWNYQTQTIT KSFEVTELPV  60
   61 RSAKFIPRKQ WVVAGADDMY IRVYNYNTMD KVKVFEAHSD YIRCVAVHPT LPYVLSSSDD 120
  121 MLIKLWDWEN GWACTQIFEG HSHYVMQVVF NPKDTNTFAS ASLDRTIKIW NLGSPDPNFT 180
  181 LDAHQKGVNC VDYFTGGDKP YLITGSDDHT AKVWDYQTKS CVQTLDGHTH NVSAVCFHPE 240
  241 LPIIITGSED GTVRIWHATT YRLENTLNYG LERVWAIGYI KSSRRVVIGY DEGTIMVKLG 300
  301 REIPVASMDS SGKIIWAKHN EIQTANIKSI GAGYEATDGE RLPLSVKELG TCDLYPQSLK 360
  361 HNPNGRFVVV CGDGEYIIYT ALAWRNRSFG SGLEFVWSSE GECAVRESSS KIKIFSKNFQ 420
  421 ERKSIRPTFS AEKIFGGTLL AMCSNDFICF YDWAECRLIQ QIDVTVKNLY WAESGDLVAI 480
  481 ASDTSFYILK YNRELVSSHF DSGRPTDEEG VEDAFEVLHE NDERVRTGIW VGDCFIYNNS 540
  541 SWKLNYCVGG EVTTMYHLDR PMYLLGYIAN QSRVYLVDKE FNVIGYTLLL SLIEYKTLVM 600
  601 RGDLDRANQI LPTIPKEQHN NVAHFLESRG MIEDALEIAT DPDYKFDLAI QLGRLEIAKE 660
  661 IAEEVQSESK WKQLGELAMS SGKLQLAEDC MKYAMDLSGL LLLYSSLGDA EGVSKLACLA 720
  721 KEQGKNNVAF LCLFTLGRLE DCLQLLVESN RIPEAALMAR SYLPSKVSEI VALWREDLSK 780
  781 VNPKAAESLA DPEEYSNLFE DWQVALSVEA NTAETRGVYT AAENYPSHAD KPSITLVEAF 840
  841 RNLQVEAEES LENGNIDHEV AEENGHVENE GDEEEQQEEE VNEEEGVVDA DSTDGAVLVN 900
  901 GSEGEEEWGT NNKGNPSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..96] PSI-BLAST 83.69897 PAF-AH Holoenzyme: Lis1/Alfa2
    2 View Details [97..628] PSI-BLAST 58.154902 Actin interacting protein 1
    3 View Details [629..823] FFAS03 1.42 Clathrin heavy chain proximal leg segment
    4 View Details [824..918] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle