| Protein: | gi|56966194, gi|... |
| Organism: | Bos taurus |
| Length: | 372 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|56966194, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
418.0 | [0..1] | [369..1291] |
|
|
411.0 | [0..2] | [369..835] |
|
|
405.0 | [0..1] | [365..1151] |
|
|
402.0 | [0..1] | [369..1079] |
|
|
399.0 | [0..1] | [369..642] |
|
Region A: Residues: [1-372] |
1 11 21 31 41 51
| | | | | |
1 MAYHSFLVEP ISCHAWNKDR TQIAICPNNH EVHIYEKSGN KWVQVHELKE HNGQVTGVDW 60
61 APDSNRIVTC GTDRNAYVWT LKGRTWKPTL VILRINRAAR CVRWAPNEKK FAVGSGSRVI 120
121 SICYFEQEND WWVCKHIKKP IRSTVLSLDW HPNSVLLAAG SCDFKCRIFS AYIKEVEERP 180
181 APTPWGSKMP FGELMFESSS SCGWVHGVCF SANGSRVAWV SHDSTVCLAD ADKKMAVATL 240
241 ASETLPLLAV TFITESSLVA AGHDCFPVLF TYDSAAGKLS FGGRLDVPKQ SSQRGLTARE 300
301 RFQNLDKKAS SEGSAAAGAG LDSLHKNSVS QISVLSGGKA KCSQFCTTGM DGGMSIWDVR 360
361 SLESALKDLK IV
|
| Detection Method: |  |
| Confidence: | 58.69897 |
| Match: | 1k8kC |
| Description: | Arp2/3 complex 41 kDa subunit ARPC1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 3.86142918698875 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| actin filament binding | 2.0735069176589 | bayes_pls_golite062009 |
| binding | 1.79788997337153 | bayes_pls_golite062009 |
| dynein binding | 1.69349714290074 | bayes_pls_golite062009 |
| protein binding | 1.11897341394404 | bayes_pls_golite062009 |
| myosin binding | 0.989691178611801 | bayes_pls_golite062009 |
| tubulin binding | 0.968047176592527 | bayes_pls_golite062009 |
| microtubule binding | 0.834073483714259 | bayes_pls_golite062009 |
| transporter activity | 0.692270256454453 | bayes_pls_golite062009 |
| 0.45054027253231 | bayes_pls_golite062009 | |
| myosin II binding | 0.33142771724387 | bayes_pls_golite062009 |
| myosin heavy chain kinase activity | 0.231534552000461 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.121183207943714 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
