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View MS Result Peptides

Run Information:

Bait Protein: RPA135
Hit Protein: NMD5
Protein Desc: Karyopherin, a carrier protein involved in nuclear import of proteins; importin beta homolog
Sequence Coverage: 2.5%
Organism: Saccharomyces cerevisiae
MS Run: View Run


Sequence Coverage:

Hit Protein
Sequence:
[NCBI BLAST]
[ProtParam]
       1          11         21         31         41         51         
       |          |          |          |          |          |          
    1  MDITELLQCF ACTLDHNAAV RTNAETHLKN ASKVPGFLGA CLDIIAADEV PENIKLSASL  60
   61  YFKNKITYGW SAGARQGSNE LLDSHVDPDE KPVVKDMLIK TMVSVSKTSP RCIRVLKSAL 120
  121  TVIISEDYPS KKWGNLLPNS LELLANEDIT VTYVGLLCLA EIFRTYRWKN NDERQDLEEL 180
  181  ILNYFPALLN YGANVLFQDG KYMNNEQIGE LVKLIIKIYK FVSYHDLPFT LQRSESFTPW 240
  241  ACFFVSIIQQ PLPQEVLSIS DIEVRSKNPW VKCKKWALAN LYRLFQRYAS TSLTRKFQYD 300
  301  EFKQMYCEEF LTQFLQVVFD QIEKWGTGQL WLSDECLYYI LNFVEQCVVQ KTTWKLVGPH 360
  361  YNVILQHVIF PLLKPTAETL EAFDNDPQEY INRNMDFWDV GYSPDLAALA LLTTCVTKRG 420
  421  KTTLQPTLEF MVSTLQSAVG DYNNIMLDNA LQIESCLRIF SSIIDRLITK DSPFASEMEK 480
  481  FILTYVLPFF KSQYGFLQSR VCDICSKLGS MDFKDPVITS TIYEGVMNCL NNSSNSLPVE 540
  541  LTAALALQTF ISDDQFNMKL SEHVVPTMQK LLSLSNDFES DVISGVMQDF VEQFAEQLQP 600
  601  FGVELMNTLV QQFLKLAIDL HETSNLDPDS FTNVDSIPDE SDKQMAALGI LSTTISILLS 660
  661  FENSPEILKN LEQSFYPAAE FILKNDIEDF YRECCEFVEN STFLLRDITP ISWKILELIG 720
  721  ECNRKPDSMV SYYLSDFMLA LNNILIYGRN ELKKNEFYTK IIFEIYQKAV TAEDNSLDDL 780
  781  RVVFDLSQEL VLALDDSLPQ QYRERLLADV VGSILTQKNE LKTNVVFSVT AFNVVISNMI 840
  841  TEPLITLQYL KQQGCLEIFF QTWITDYIPN YKRCYDIKLS VLALLKIILK LESNDYSVLN 900
  901  LENLVPQLGS IVTQLASRLP TALRQLANQR KEFSSSGFEE DTKWDENFLD VGDDDENDDE 960
  961  GDLTEKYLEL IKNRADSLDF VDGYDAKETF DDLEEDPLTG SILDTVDVYK VFKESIANLQ1020
 1021  HVDSNRYQGI LRHLTPADQE LFMGIMNA

Run Result Peptides:

XCorr Delta CN M+H+ Total
Intensity
Sp
Rank
Ion
Prop.
Red. Sequence
[No Spectrum] 1.8076 0.0238 683.48 2540.2 14 75.0 1 L.EIFFQ.T
[No Spectrum] 2.6365 0.0839 2263.45 6734.1 71 30.0 1 V.PQLGSIVTQLASRLPTALRQL.A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle